RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 RIPK2O43353 540 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 PCDH7O60245 1069 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 NME6O75414 186 aaPredicted RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 ACTL6AO96019 429 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 HPNP05981 417 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 IL3P08700 152 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 MYL2P10916 166 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 CYP4B1P13584 511 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 HSD3B1P14060 373 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 HSD3B2P26439 372 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 GCAP28676 217 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ECHS1P30084 290 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 EMDP50402 254 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 DGKQP52824 942 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 PRKAA2P54646 552 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 NAGLUP54802 743 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 PKNOX1P55347 436 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 DLX5P56178 289 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 MRPS35P82673 323 aaKnown RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 HMGCS1Q01581 520 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 DUSP2Q05923 314 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 CSTF3Q12996 717 aaKnown RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 SNTA1Q13424 505 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 RCAN2Q14206 197 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ERCC6LQ2NKX8 1250 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ACSF3Q4G176 576 aaPredicted RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 SPIN4Q56A73 249 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 CFAP157Q5JU67 520 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 SH2D4BQ5SQS7 431 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 FAM219BQ5XKK7 198 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 OR5M10Q6IEU7 315 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 SEM1Q6ZVN7 128 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 CHMP1BQ7LBR1 199 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 LCA5Q86VQ0 697 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 LACC1Q8IV20 430 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 TRIM42Q8IWZ5 723 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ZZZ3Q8IYH5 903 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 SAMD14Q8IZD0 417 aaPredicted RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 CCDC63Q8NA47 563 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ACBD4Q8NC06 268 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 C17orf47Q8NEP4 570 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 GOT1L1Q8NHS2 421 aaPredicted RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 CDC26Q8NHZ8 85 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ACMSDQ8TDX5 336 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 C16orf78Q8WTQ4 265 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 TMBIM1Q969X1 311 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 TRIM44Q96DX7 344 aaPredicted RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 CCDC126Q96EE4 140 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 CNRIP1Q96F85 164 aaPredicted RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 APIPQ96GX9 242 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 WDYHV1Q96HA8 205 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 TMEM41AQ96HV5 264 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ZNF681Q96N22 645 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 COL21A1Q96P44 957 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 BBS4Q96RK4 519 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ZNF382Q96SR6 550 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ADOQ96SZ5 270 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 TREX2Q9BQ50 279 aaPredicted RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 EBPLQ9BY08 206 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 UGT2B28Q9BY64 529 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 POLDIP3Q9BY77 421 aaKnown RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 ACPTQ9BZG2 426 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 GALNT9Q9HCQ5 603 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 SERHLQ9NQF3 203 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 SLC35C2Q9NQQ7 365 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 TAS2R9Q9NYW1 312 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 SENP1Q9P0U3 644 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 HEY2Q9UBP5 337 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 ZNF629Q9UEG4 869 aaPredicted RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 ZNF639Q9UID6 485 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 MCM8Q9UJA3 840 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 EDARQ9UNE0 448 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 EXO1Q9UQ84 846 aaKnown RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 DTX4Q9Y2E6 619 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 STK38LQ9Y2H1 464 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 GPR55Q9Y2T6 319 aaPredicted RBP5.86□□□□□ -1.47
TCF4-228ENST00000565393 C15orf41Q9Y2V0 281 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 PLLPQ9Y342 182 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 PCDHGB3Q9Y5G1 929 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 DOCK10Q96BY6 2186 aa5.86□□□□□ -1.47
TCF4-228ENST00000565393 FRG2CA6NGY1 282 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 SMIM23A6NLE4 172 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 KDM4EB2RXH2 506 aaPredicted RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 UGT2B11O75310 529 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 SEC22BO75396 215 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 ERN1O75460 977 aaKnown RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 CBX7O95931 251 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 ENO1P06733 434 aaKnown RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 ABHD2P08910 425 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 IGFBP2P18065 325 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 TCEA1P23193 301 aaKnown RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 CTSSP25774 331 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 PTPN6P29350 595 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 IL12BP29460 328 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 CEACAM8P31997 349 aaPredicted RBP5.85□□□□□ -1.47
TCF4-228ENST00000565393 TIMP3P35625 211 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 PEX19P40855 299 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 SLCO1A2P46721 670 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 CCT5P48643 541 aa5.85□□□□□ -1.47
TCF4-228ENST00000565393 STARP49675 285 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms