RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 TOXO94900 526 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 SNX4O95219 450 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 CBX7O95931 251 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 SHBGP04278 402 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 GABRA1P14867 456 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 ADH7P40394 386 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 CASP3P42574 277 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 ZFP36L2P47974 494 aaKnown RBP16.19■□□□□ 0.18
NME3-205ENST00000563854 KRTAP10-9P60411 292 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 RAE1P78406 368 aaKnown RBP16.19■□□□□ 0.18
NME3-205ENST00000563854 IMPG1Q17R60 797 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 WDR53Q7Z5U6 358 aaPredicted RBP16.19■□□□□ 0.18
NME3-205ENST00000563854 CCDC116Q8IYX3 515 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 C17orf47Q8NEP4 570 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 OR9A2Q8NGT5 310 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 C16orf78Q8WTQ4 265 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 KAT2AQ92830 837 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 LCORQ96JN0 433 aaPredicted RBP16.19■□□□□ 0.18
NME3-205ENST00000563854 ZNF681Q96N22 645 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 SECISBP2Q96T21 854 aaKnown RBP16.19■□□□□ 0.18
NME3-205ENST00000563854 ANGPTL4Q9BY76 406 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 ANKRA2Q9H9E1 313 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 GIMAP4Q9NUV9 329 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 KLRF1Q9NZS2 232 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 SENP1Q9P0U3 644 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 PRODH2Q9UF12 536 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 EMCNQ9ULC0 261 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 C15orf41Q9Y2V0 281 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 SLC6A5Q9Y345 797 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 CSMD1Q96PZ7 3565 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 C2orf72A6NCS6 295 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 NME6O75414 186 aaPredicted RBP16.18■□□□□ 0.18
NME3-205ENST00000563854 ABCB1P08183 1280 aaPredicted RBP16.18■□□□□ 0.18
NME3-205ENST00000563854 ELAVL4P26378 380 aaKnown RBP16.18■□□□□ 0.18
NME3-205ENST00000563854 MSX1P28360 303 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 TIA1P31483 386 aaKnown RBP eCLIP16.18■□□□□ 0.18
NME3-205ENST00000563854 FOXA1P55317 472 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 TFF3Q07654 80 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 CFAP157Q5JU67 520 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 ANGPTL8Q6UXH0 198 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 ZYG11AQ6WRX3 759 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 ULK2Q8IYT8 1036 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 CCDC126Q96EE4 140 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 C14orf79Q96F83 325 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 NODALQ96S42 347 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 OSBPL11Q9BXB4 747 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 ZNF639Q9UID6 485 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 CAMK2AQ9UQM7 478 aa16.18■□□□□ 0.18
NME3-205ENST00000563854 NINQ8N4C6 2090 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 EXPH5Q8NEV8 1989 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 G3V2L1 256 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 UBFD1O14562 309 aaKnown RBP16.17■□□□□ 0.18
NME3-205ENST00000563854 ANXA4P09525 319 aaPredicted RBP16.17■□□□□ 0.18
NME3-205ENST00000563854 DRD2P14416 443 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 CDK9P50750 372 aaKnown RBP16.17■□□□□ 0.18
NME3-205ENST00000563854 NAGLUP54802 743 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 WNT3P56703 355 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 HEPACAMQ14CZ8 416 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 ERCC6LQ2NKX8 1250 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 EIPR1Q53HC9 387 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 WIPI1Q5MNZ9 446 aaPredicted RBP16.17■□□□□ 0.18
NME3-205ENST00000563854 FNDC7Q5VTL7 733 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 LIX1LQ8IVB5 337 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 OR1J4Q8NGS1 313 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 EPS8L3Q8TE67 593 aaKnown RBP16.17■□□□□ 0.18
NME3-205ENST00000563854 CTHRC1Q96CG8 243 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 HSPBAP1Q96EW2 488 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 SHCBP1LQ9BZQ2 653 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 C12orf65Q9H3J6 166 aaKnown RBP16.17■□□□□ 0.18
NME3-205ENST00000563854 GALNT9Q9HCQ5 603 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 MAPRE3Q9UPY8 281 aa16.17■□□□□ 0.18
NME3-205ENST00000563854 FAM47E-STBD1D6RA91 191 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 ACOX3O15254 700 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 UGT2B11O75310 529 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 REM1O75628 298 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 PROCP04070 461 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 HOXD4P09016 255 aaPredicted RBP16.16■□□□□ 0.18
NME3-205ENST00000563854 SOX18P35713 384 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 EMDP50402 254 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 CRYZQ08257 329 aaKnown RBP16.16■□□□□ 0.18
NME3-205ENST00000563854 MYBPHQ13203 477 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 ZNF628Q5EBL2 1059 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 RIPPLY2Q5TAB7 128 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 NUP54Q7Z3B4 507 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 FAM9CQ8IZT9 166 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 CLYBLQ8N0X4 340 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 ACBD4Q8NC06 268 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 RDH11Q8TC12 318 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 HGDQ93099 445 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 TMBIM1Q969X1 311 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 TMEM41AQ96HV5 264 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 BBS4Q96RK4 519 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 MCCC2Q9HCC0 563 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 SLC35C2Q9NQQ7 365 aa16.16■□□□□ 0.18
NME3-205ENST00000563854 PRAMEF25A6NGN4 478 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 FRG2CA6NGY1 282 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 KDM4EB2RXH2 506 aaPredicted RBP16.15■□□□□ 0.18
NME3-205ENST00000563854 COPEO14579 308 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 ICOSLGO75144 302 aa16.15■□□□□ 0.18
NME3-205ENST00000563854 HPNP05981 417 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms