RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ELK4P28324 431 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 SLC18A1P54219 525 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 GRB7Q14451 532 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 COL28A1Q2UY09 1125 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.71□□□□□ -0.7
RPAP1-204ENST00000562303 TMEM25Q86YD3 366 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 PRR18Q8N4B5 295 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 ZNF610Q8N9Z0 462 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 FCRL3Q96P31 734 aaPredicted RBP10.71□□□□□ -0.7
RPAP1-204ENST00000562303 HHIPQ96QV1 700 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 OR5B2Q96R09 309 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 DPH2Q9BQC3 489 aaPredicted RBP10.71□□□□□ -0.7
RPAP1-204ENST00000562303 RANBP3Q9H6Z4 567 aaPredicted RBP10.71□□□□□ -0.7
RPAP1-204ENST00000562303 SCAMP2O15127 329 aaKnown RBP10.71□□□□□ -0.7
RPAP1-204ENST00000562303 SLC10A3P09131 477 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 RHCEP18577 417 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 RPS3P23396 243 aaKnown RBP eCLIP10.71□□□□□ -0.7
RPAP1-204ENST00000562303 TNFSF4P23510 183 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 TLE3Q04726 772 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 MRPL21Q7Z2W9 205 aaKnown RBP10.71□□□□□ -0.7
RPAP1-204ENST00000562303 CHPT1Q8WUD6 406 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 PEX13Q92968 403 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 ARL5BQ96KC2 179 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 ANKMY1Q9P2S6 941 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 DNAJB11Q9UBS4 358 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 PTRH2Q9Y3E5 179 aaKnown RBP10.71□□□□□ -0.7
RPAP1-204ENST00000562303 HSPB11Q9Y547 144 aa10.71□□□□□ -0.7
RPAP1-204ENST00000562303 PABPC4LP0CB38 370 aaKnown RBP10.7□□□□□ -0.7
RPAP1-204ENST00000562303 CTXN1P60606 82 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 NTHL1P78549 312 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 TAP2Q03519 686 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 SOX4Q06945 474 aaPredicted RBP10.7□□□□□ -0.7
RPAP1-204ENST00000562303 GRIN2CQ14957 1233 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 LYSMD4Q5XG99 296 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 IGFN1Q86VF2 1251 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 SLC5A8Q8N695 610 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 OR5T1Q8NG75 326 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 RHEBL1Q8TAI7 183 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 C2orf72A6NCS6 295 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 H3BML4 177 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 DRD1P21728 446 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 SPINT3P49223 89 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 ZNF81P51508 661 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 PRAMEF8Q5VWM4 474 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 PRAMEF7Q5VXH5 474 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 TMEM236Q5W0B7 351 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 BAIAP2L2Q6UXY1 529 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 IGDCC3Q8IVU1 814 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.7□□□□□ -0.7
RPAP1-204ENST00000562303 MRPL41Q8IXM3 137 aaKnown RBP10.7□□□□□ -0.7
RPAP1-204ENST00000562303 FAM210AQ96ND0 272 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 OR5B12Q96R08 314 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 RGCCQ9H4X1 137 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 CCDC163A0A0D9SF12 145 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 YY2O15391 372 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 ADAMTS4O75173 837 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 S1PR4O95977 384 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 UCHL1P09936 223 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 SLC2A5P22732 501 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 MAP2K4P45985 399 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 PXNP49023 591 aaPredicted RBP10.7□□□□□ -0.7
RPAP1-204ENST00000562303 ERVK-16P61578 105 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 ATP6AP1Q15904 470 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 NTRK2Q16620 822 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 TECRLQ5HYJ1 363 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 RANBP9Q96S59 729 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 RAB9BQ9NP90 201 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 MAB21L2Q9Y586 359 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 B3GALT1Q9Y5Z6 326 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 ZNF487B1APH4 448 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 OXSR1O95747 527 aaPredicted RBP10.7□□□□□ -0.7
RPAP1-204ENST00000562303 CD53P19397 219 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 SOX3P41225 446 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 EMP2P54851 167 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 NKX3-2P78367 333 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 TMEM53Q6P2H8 277 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 PHC2Q8IXK0 858 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 OR9A4Q8NGU2 314 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 PPP1R35Q8TAP8 253 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 FAM46AQ96IP4 442 aaKnown RBP10.7□□□□□ -0.7
RPAP1-204ENST00000562303 MYRFLQ96LU7 910 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 ALOXE3Q9BYJ1 711 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 CUEDC1Q9NWM3 386 aaPredicted RBP10.7□□□□□ -0.7
RPAP1-204ENST00000562303 KCMF1Q9P0J7 381 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 GHRLQ9UBU3 117 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 GJD2Q9UKL4 321 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 MROH1Q8NDA8 1641 aa10.7□□□□□ -0.7
RPAP1-204ENST00000562303 SYT7O43581 403 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 CLIC3O95833 236 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 RAB15P59190 212 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 RBPJQ06330 500 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 APOFQ13790 326 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 SERINC2Q96SA4 455 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 NELL2Q99435 816 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 KLHL13Q9P2N7 655 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 MCTS1Q9ULC4 181 aaKnown RBP10.69□□□□□ -0.7
RPAP1-204ENST00000562303 MAFKO60675 156 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 GPR32O75388 356 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 TIMP1P01033 207 aa10.69□□□□□ -0.7
RPAP1-204ENST00000562303 CTSAP10619 480 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms