RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 HGDQ93099 445 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 ISL2Q96A47 359 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 TMEM41AQ96HV5 264 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 DPH5Q9H2P9 285 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 ACTR8Q9H981 624 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 SAYSD1Q9NPB0 183 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 TAS2R10Q9NYW0 307 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 NDRG3Q9UGV2 375 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 PACSIN3Q9UKS6 424 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 SNX24Q9Y343 169 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 ANK2Q01484 3957 aa10.59□□□□□ -0.71
NSMCE1-202ENST00000561960 ANKRD33BA6NCL7 494 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 SYNDIG1LA6NDD5 238 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 PRAMEF25A6NGN4 478 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 FAM171A2A8MVW0 826 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 CAPN14A8MX76 684 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 SEC14L5O43304 696 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 ERAL1O75616 437 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 PPM1BO75688 479 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 SEC31AO94979 1220 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 RCBTB2O95199 551 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 SIX3O95343 332 aaPredicted RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 IL18BPO95998 194 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 KLK1P06870 262 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 SLC35E2BP0CK96 405 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 SLC35E2P0CK97 266 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 PTH2RP49190 550 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 LHX2P50458 406 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 XKP51811 444 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 MRPS35P82673 323 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 TBL3Q12788 808 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 PFKFB4Q16877 469 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 MRM1Q6IN84 353 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 DND1Q8IYX4 353 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 ZCCHC7Q8N3Z6 543 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 ZPLD1Q8TCW7 415 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 NXNL1Q96CM4 212 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 STARD4Q96DR4 205 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 TSPAN17Q96FV3 270 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 PGM2Q96G03 612 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 SFXN2Q96NB2 322 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 RBBP8Q99708 897 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 TM9SF2Q99805 663 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 BDH2Q9BUT1 245 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 MRPL1Q9BYD6 325 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 KLHL4Q9C0H6 718 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 POPDC3Q9HBV1 291 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 LYARQ9NX58 379 aaKnown RBP10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 MS4A12Q9NXJ0 267 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 NUDT4Q9NZJ9 180 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 TXNDC16Q9P2K2 825 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 RNF14Q9UBS8 474 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 DKKL1Q9UK85 242 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 SNX12Q9UMY4 172 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 ABCA1O95477 2261 aa10.58□□□□□ -0.72
NSMCE1-202ENST00000561960 RNF212BA8MTL3 300 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 SHISA8B8ZZ34 492 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 CES2O00748 559 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 ACTL6AO96019 429 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 S1PR1P21453 382 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 ALDH9A1P49189 494 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 TMED10P49755 219 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 DIO3P55073 304 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 GFRA1P56159 465 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 CLDN18P56856 261 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 RAB10P61026 200 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 ATP6V0D1P61421 351 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 KRTAP1-1Q07627 177 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 FUT7Q11130 342 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 STX5Q13190 355 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 SF3B4Q15427 424 aaKnown RBP eCLIP10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 TRMT12Q53H54 448 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 C6orf163Q5TEZ5 329 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 OR52E8Q6IFG1 317 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 GOLGA7Q7Z5G4 137 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 ISCA2Q86U28 154 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 PHC2Q8IXK0 858 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 OR52R1Q8NGF1 315 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 PIGTQ969N2 578 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 UBE2E3Q969T4 207 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 TMBIM1Q969X1 311 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 ATOH8Q96SQ7 321 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 HBEGFQ99075 208 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 GPR22Q99680 433 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 PELOQ9BRX2 385 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 CENPKQ9BS16 269 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 WDR41Q9HAD4 459 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 CPSF2Q9P2I0 782 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 CLEC4AQ9UMR7 237 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 PLLPQ9Y342 182 aa10.57□□□□□ -0.72
NSMCE1-202ENST00000561960 A0A087X1B8 175 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 EFCAB8A8MWE9 144 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 SCO2O43819 266 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 GFAPP14136 432 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 CPMP14384 443 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 POU2F1P14859 743 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 CPN1P15169 458 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 PCSK2P16519 638 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 TSPAN8P19075 237 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms