RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 P3H4Q92791 437 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 EMG1Q92979 244 aaKnown RBP3.12□□□□□ -1.91
SPG11-218ENST00000559754 AGPAT1Q99943 283 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CCDC3Q9BQI4 270 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 JPH2Q9BR39 696 aaPredicted RBP3.12□□□□□ -1.91
SPG11-218ENST00000559754 NDUFAF3Q9BU61 184 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 GPR61Q9BZJ8 451 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CLSTN2Q9H4D0 955 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CALHM2Q9HA72 323 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 APMAPQ9HDC9 416 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 PLEK2Q9NYT0 353 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 MRTO4Q9UKD2 239 aaKnown RBP3.12□□□□□ -1.91
SPG11-218ENST00000559754 PSME2Q9UL46 239 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 B9D1Q9UPM9 204 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 PPP1R3CQ9UQK1 317 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 OR10H1Q9Y4A9 318 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 ETV7Q9Y603 341 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 SLCO1B1Q9Y6L6 691 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 EIF4G1Q04637 1599 aaKnown RBP3.12□□□□□ -1.91
SPG11-218ENST00000559754 CARMIL1Q5VZK9 1371 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 PARD3Q8TEW0 1356 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 TRBV5-5A0A0J9YX44 114 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 GSAPA4D1B5 854 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 GOLGA8OA6NCC3 632 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 HELTA6NFD8 242 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 PCP4L1A6NKN8 68 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 YJEFN3A6XGL0 299 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 ZNF732B4DXR9 585 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 PPIAL4DF5H284 164 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 GOLGA8NF8WBI6 632 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 SDHDO14521 159 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 CCSO14618 274 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 CASC3O15234 703 aaKnown RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 PI15O43692 258 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 KIF5CO60282 957 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 ECE2O60344 883 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 BCAS1O75363 584 aaPredicted RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 CLDN1O95832 211 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 CHRNA1P02708 482 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 ZNF44P15621 663 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 DLSTP36957 453 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 MMP12P39900 470 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 ACADSBP45954 432 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 GSCP56915 257 aaPredicted RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 PLD1Q13393 1074 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 OR1C1Q15619 314 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 EXOC3L2Q2M3D2 409 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 GPR33Q49SQ1 333 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 LIPJQ5W064 366 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 TTC23Q5W5X9 447 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 RTL6Q6ICC9 239 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 CDC42EP5Q6NZY7 148 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 DHRS11Q6UWP2 260 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 CWC27Q6UX04 472 aaKnown RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 OTUD6AQ7L8S5 288 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 GOLGA7Q7Z5G4 137 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 PTAR1Q7Z6K3 402 aaPredicted RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 EID3Q8N140 333 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 KLHDC1Q8N7A1 406 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 LRTM2Q8N967 370 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 CCDC148Q8NFR7 591 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 OR4C15Q8NGM1 316 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 PNPT1Q8TCS8 783 aaKnown RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 TMEM37Q8WXS4 190 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 OSTF1Q92882 214 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 RASD2Q96D21 266 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 OMA1Q96E52 524 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 CXorf58Q96LI9 332 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 VSTM2LQ96N03 204 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 FOXN4Q96NZ1 517 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 CASD1Q96PB1 797 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 RAB11FIP5Q9BXF6 653 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 MTIF3Q9H2K0 278 aaKnown RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 RPAP3Q9H6T3 665 aaPredicted RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 YY1AP1Q9H869 796 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 METTL7AQ9H8H3 244 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 FAM114A2Q9NRY5 505 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 ETNK2Q9NVF9 386 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 TBC1D13Q9NVG8 400 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 HOXC10Q9NYD6 342 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 OR6C2Q9NZP2 312 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 CRLS1Q9UJA2 301 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 FBXL4Q9UKA2 621 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 NIP7Q9Y221 180 aaKnown RBP eCLIP3.11□□□□□ -1.91
SPG11-218ENST00000559754 CHTOPQ9Y3Y2 248 aaKnown RBP3.11□□□□□ -1.91
SPG11-218ENST00000559754 AP4B1Q9Y6B7 739 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 TTC41PQ6P2S7 1318 aa3.11□□□□□ -1.91
SPG11-218ENST00000559754 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.11□□□□□ -1.91
SPG11-218ENST00000559754 PCNX3Q9H6A9 2034 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 SPATA31D1Q6ZQQ2 1576 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 GOLGA6L7A0A1B0GV03 622 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 ERICH4A6NGS2 130 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 C15orf61A6NNL5 157 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 WASH3PC4AMC7 463 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 CLDN5O00501 218 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 ZNF208O43345 1280 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 SRSF10O75494 262 aaKnown RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 KRT33AO76009 404 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 MBD3O95983 291 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms