RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 MRTO4Q9UKD2 239 aaKnown RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 GPR55Q9Y2T6 319 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 PCDHGB3Q9Y5G1 929 aa12.67□□□□□ -0.38
SHMT2-234ENST00000557703 SMG1Q96Q15 3661 aaKnown RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 TNRC6AQ8NDV7 1962 aaKnown RBP12.67□□□□□ -0.38
SHMT2-234ENST00000557703 A0A1W2PS29 197 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 ANKRD33BA6NCL7 494 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 KLRC4-KLRK1H3BQV0 150 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 K7EM74 188 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 HRKO00198 91 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 WWP2O00308 870 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 TP53I11O14683 189 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 SUV39H1O43463 412 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 PRKNO60260 465 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 SORBS2O94875 1100 aaKnown RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 PGRP06401 933 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 FBXO45P0C2W1 286 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 GPX3P22352 226 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 LCN1P31025 176 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 SOX18P35713 384 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 PSMD4P55036 377 aaKnown RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 MRPS35P82673 323 aaKnown RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 OC90Q02509 493 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 DUSP2Q05923 314 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 OR1C1Q15619 314 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 PGS1Q32NB8 556 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF385BQ569K4 471 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 TBCELQ5QJ74 424 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 TMEM81Q6P7N7 255 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 RTL4Q6ZR62 310 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 CYP4Z2PQ8N1L4 340 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF843Q8N446 348 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 TRIML2Q8N7C3 387 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF321PQ8N8H1 164 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 CDRT4Q8N9R6 151 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 POGLUT1Q8NBL1 392 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 OR7G2Q8NG99 324 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 GOT1L1Q8NHS2 421 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 THAP3Q8WTV1 239 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 KAT2AQ92830 837 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 CHMP6Q96FZ7 201 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 SCMH1Q96GD3 660 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 VSTM2LQ96N03 204 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 MS4A4EQ96PG1 132 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF317Q96PQ6 595 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 RMND5AQ9H871 391 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 ZBTB20Q9HC78 741 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 CNIH4Q9P003 139 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 KLHL14Q9P2G3 628 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 ERVK-11Q9UQG0 969 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 KLF13Q9Y2Y9 288 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-234ENST00000557703 NPFFR2Q9Y5X5 522 aa12.66□□□□□ -0.38
SHMT2-234ENST00000557703 FAM234BA2RU67 622 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 SCN2BO60939 215 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 ERN1O75460 977 aaKnown RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 SLC25A12O75746 678 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 NEURL1O76050 574 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 CRYABP02511 175 aaKnown RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 SP1P08047 785 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 ADSLP30566 484 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 MC3RP41968 323 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 PRIM2P49643 509 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 HSPB3Q12988 150 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 LTB4RQ15722 352 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 NTRK2Q16620 822 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 PRSS53Q2L4Q9 553 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF791Q3KP31 576 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 FAM174BQ3ZCQ3 159 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 PLEKHN1Q494U1 663 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF766Q5HY98 468 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 FCRLBQ6BAA4 426 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 SLC25A25Q6KCM7 469 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 FAM180BQ6P0A1 224 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 TMEM107Q6UX40 140 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF551Q7Z340 670 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 CIDECQ96AQ7 238 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 SPACA9Q96E40 222 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 DTNBP1Q96EV8 351 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 RILPQ96NA2 401 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 CCDC115Q96NT0 180 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 GAL3ST4Q96RP7 486 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 LMF2Q9BU23 707 aaKnown RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 NSRP1Q9H0G5 558 aaKnown RBP12.65□□□□□ -0.38
SHMT2-234ENST00000557703 Q9N2J8 555 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 NPHS2Q9NP85 383 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 FGFR1OP2Q9NVK5 253 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 PCDHGA10Q9Y5H3 936 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 BSNQ9UPA5 3926 aa12.65□□□□□ -0.38
SHMT2-234ENST00000557703 A0A0G2JND7 137 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 DUXAA6NLW8 204 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 CFLARO15519 480 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 AGR2O95994 175 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 KRT20P35900 424 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 SOX3P41225 446 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 CCT3P49368 545 aaKnown RBP12.64□□□□□ -0.39
SHMT2-234ENST00000557703 NR0B1P51843 470 aaKnown RBP12.64□□□□□ -0.39
SHMT2-234ENST00000557703 PNLIPRP2P54317 469 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 UFM1P61960 85 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 SNTA1Q13424 505 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 TP53BP2Q13625 1128 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms