RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TAS2R10Q9NYW0 307 aa8.19□□□□□ -1.1
HNRNPC-227ENST00000556897 KLRF1Q9NZS2 232 aa8.19□□□□□ -1.1
HNRNPC-227ENST00000556897 OPTCQ9UBM4 332 aa8.19□□□□□ -1.1
HNRNPC-227ENST00000556897 ADGRE2Q9UHX3 823 aa8.19□□□□□ -1.1
HNRNPC-227ENST00000556897 DTX4Q9Y2E6 619 aa8.19□□□□□ -1.1
HNRNPC-227ENST00000556897 ABCA1O95477 2261 aa8.19□□□□□ -1.1
HNRNPC-227ENST00000556897 CHD3Q12873 2000 aaKnown RBP8.19□□□□□ -1.1
HNRNPC-227ENST00000556897 CUBNO60494 3623 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 ANK3Q12955 4377 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 SUPT3HB4E1H0 165 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 K7EPI3 171 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 PLOD2O00469 737 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 SUPT3HO75486 399 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 PPM1BO75688 479 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 CBR3O75828 277 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 EPB42P16452 691 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 STMN1P16949 149 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 NT5EP21589 574 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 GPX3P22352 226 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 CRYGSP22914 178 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 CHMP24386 653 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 PTX3P26022 381 aaPredicted RBP8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 CNTFP26441 200 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 PIK3R1P27986 724 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 UGT2B10P36537 528 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 CD79BP40259 229 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 LHX2P50458 406 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 ARFIP1P53367 373 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 GFRA1P56159 465 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 CLDN18P56856 261 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 EEF1A1P68104 462 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 EEF1A1P5Q5VTE0 462 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 OR52E8Q6IFG1 317 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 SLC30A6Q6NXT4 461 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 VWA1Q6PCB0 445 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 ZNF474Q6S9Z5 364 aaPredicted RBP8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 ISCA2Q86U28 154 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 CNEP1R1Q8N9A8 125 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 STAG3L4Q8TBR4 150 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 HGDQ93099 445 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 CTHRC1Q96CG8 243 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 STARD4Q96DR4 205 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 OMA1Q96E52 524 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 UBXN10Q96LJ8 280 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 OSBPL9Q96SU4 736 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 OR2B2Q9GZK3 357 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 OPN3Q9H1Y3 402 aaPredicted RBP8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 ACTR8Q9H981 624 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 NSMCE4AQ9NXX6 385 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 EHD3Q9NZN3 535 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 EXO1Q9UQ84 846 aaKnown RBP8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 PPP2R2CQ9Y2T4 447 aa8.18□□□□□ -1.1
HNRNPC-227ENST00000556897 RAI1Q7Z5J4 1906 aaPredicted RBP8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 PRAMEF25A6NGN4 478 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 CXorf49A8MYA2 514 aaPredicted RBP8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 UBXN8O00124 270 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 TP73O15350 636 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 UGT2B11O75310 529 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 RHOXF2BP0C7M4 288 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 CPMP14384 443 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 POU2F1P14859 743 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 ZNF708P17019 499 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 NAGAP17050 411 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 S1PR1P21453 382 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 TCEA1P23193 301 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 LOXP28300 417 aaPredicted RBP8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 PCYT1AP49585 367 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 XKP51811 444 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 NEK2P51955 445 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 KRTAP1-1Q07627 177 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 PLCXD2Q0VAA5 305 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 SNTA1Q13424 505 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 CUL3Q13618 768 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 ZKSCAN8Q15776 578 aaPredicted RBP8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 CPSF6Q16630 551 aaKnown RBP eCLIP8.17□□□□□ -1.13e-7■■■□□ 15.6
HNRNPC-227ENST00000556897 C6orf163Q5TEZ5 329 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 TMEM81Q6P7N7 255 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 AAGABQ6PD74 315 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 SCIMPQ6UWF3 145 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 C22orf34Q6ZV56 151 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 ZNF550Q7Z398 422 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 NUP54Q7Z3B4 507 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 P4HA3Q7Z4N8 544 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 BTLAQ7Z6A9 289 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 NUDT13Q86X67 352 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 TEX9Q8N6V9 391 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 OR7G1Q8NGA0 311 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 OR4K14Q8NGD5 310 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 UBTD2Q8WUN7 234 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 PGM2Q96G03 612 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 MARK4Q96L34 752 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 SFXN2Q96NB2 322 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 GPR22Q99680 433 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 ITPAQ9BY32 194 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 NUDT4Q9NZJ9 180 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 TXNDC16Q9P2K2 825 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 HEY2Q9UBP5 337 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 FBXL2Q9UKC9 423 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 DLGAP4Q9Y2H0 992 aa8.17□□□□□ -1.1
HNRNPC-227ENST00000556897 TSC22D4Q9Y3Q8 395 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms