RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ATP6V1E1P36543 226 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 NDST2P52849 883 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 NUCB2P80303 420 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 MRPS6P82932 125 aaKnown RBP3.86□□□□□ -1.79
PRPF39-209ENST00000556353 GPM6BQ13491 265 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 UGCGQ16739 394 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 TMEM266Q2M3C6 531 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 LETM2Q2VYF4 491 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 ATP1A1-AS1Q5TC04 95 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 VITQ6UXI7 678 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 CENPVQ7Z7K6 275 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-209ENST00000556353 CATSPER3Q86XQ3 398 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 EFCAB13Q8IY85 973 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 KRT222Q8N1A0 295 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-209ENST00000556353 SEPT8Q92599 483 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 NSMAFQ92636 917 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 RBM18Q96H35 190 aaKnown RBP3.86□□□□□ -1.79
PRPF39-209ENST00000556353 NUDT16L1Q9BRJ7 211 aaKnown RBP3.86□□□□□ -1.79
PRPF39-209ENST00000556353 CENPOQ9BU64 300 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 DNAI2Q9GZS0 605 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 SDCBP2Q9H190 292 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 PSTPIP2Q9H939 334 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 TBC1D7Q9P0N9 293 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 SPATA7Q9P0W8 599 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 ANAPC2Q9UJX6 822 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 RPS6KA6Q9UK32 745 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 RALGAPA1Q6GYQ0 2036 aa3.86□□□□□ -1.79
PRPF39-209ENST00000556353 EML5Q05BV3 1969 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 IGHV3-20A0A0C4DH32 117 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 ERICH2A1L162 156 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 TMEM150BA6NC51 233 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 ZNF840PA6NDX5 716 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 H0YC42 278 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 KIF2AO00139 706 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 DDX39AO00148 427 aaKnown RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 RTCAO00442 366 aaKnown RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 NDC80O14777 642 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 P4HA2O15460 535 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 MBTPS2O43462 519 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 ADAM20O43506 726 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 TBCAO75347 108 aaKnown RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 RHOXF2BP0C7M4 288 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 GZMAP12544 262 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 CYP11B2P19099 503 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 MUTP22033 750 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 RDXP35241 583 aaKnown RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 KRT20P35900 424 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 NNMTP40261 264 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 ASMTP46597 345 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 EVCP57679 992 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 AKAP17AQ02040 695 aaKnown RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 KIAA0141Q14154 515 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 CLPPQ16740 277 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 CEP55Q53EZ4 464 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 BMP2KLQ5H9B9 411 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 TMEM31Q5JXX7 168 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 OR4C11Q6IEV9 310 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 FAM228AQ86W67 206 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 FGFRL1Q8N441 504 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 GBP7Q8N8V2 638 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 LRTM2Q8N967 370 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 SLC4A11Q8NBS3 891 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 OR52K2Q8NGK3 314 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 SPPL2AQ8TCT8 520 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 OTUB1Q96FW1 271 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 NAP1L3Q99457 506 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 RHOXF2Q9BQY4 288 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 PI4K2AQ9BTU6 479 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 CAPS2Q9BXY5 557 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 ACTL8Q9H568 366 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 ANKEF1Q9NU02 776 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 MRGBPQ9NV56 204 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 MTRRQ9UBK8 725 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 MTF2Q9Y483 593 aaPredicted RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 TRPV2Q9Y5S1 764 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 NFASCO94856 1347 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 TCHHQ07283 1943 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 TICRRQ7Z2Z1 1910 aa3.85□□□□□ -1.79
PRPF39-209ENST00000556353 ZNF638Q14966 1978 aaKnown RBP3.85□□□□□ -1.79
PRPF39-209ENST00000556353 PKD1L2Q7Z442 2459 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 KIAA1549LQ6ZVL6 1849 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 SCN1AP35498 2009 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 A0A087WWV3 80 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 KLF18A0A0U1RQI7 1052 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CCDC69A6NI79 296 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 HIDE1A8MVS5 230 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 DKC1O60832 514 aaKnown RBP eCLIP3.84□□□□□ -1.79
PRPF39-209ENST00000556353 PALMO75781 387 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 STBD1O95210 358 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 GSRP00390 522 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 S100A5P33763 92 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CD86P42081 329 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 ATP4BP51164 291 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 NAPAP54920 295 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 RWDD2BP57060 319 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 ILF2Q12905 390 aaKnown RBP3.84□□□□□ -1.79
PRPF39-209ENST00000556353 SNTB1Q13884 538 aaKnown RBP3.84□□□□□ -1.79
PRPF39-209ENST00000556353 BTG3Q14201 252 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms