RNA–Protein interactions for RNA: ENST00000556336.5

RPGRIP1-210, Transcript of RPGR interacting protein 1, humanhuman

TSL 5 BASIC

Gene RPGRIP1, Length 2,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-210ENST00000556336 LIPEQ05469 1076 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 GTF2H3Q13889 308 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 KIAA0040Q15053 153 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 SPANXN2Q5MJ10 180 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 PDZK1Q5T2W1 519 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 IER5LQ5T953 404 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 C3orf33Q6P1S2 294 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 RRM2BQ7LG56 351 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 NEIL2Q969S2 332 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 TMEM125Q96AQ2 219 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 DPCDQ9BVM2 203 aaPredicted RBP13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 FZD3Q9NPG1 666 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 PCDHA9Q9Y5H5 950 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 PEX16Q9Y5Y5 336 aa13.97□□□□□ -0.17
RPGRIP1-210ENST00000556336 ARNTLO00327 626 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 KHNYNO15037 678 aaKnown RBP13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 SCAMP2O15127 329 aaKnown RBP13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 SIGLEC6O43699 453 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 MRPS14O60783 128 aaKnown RBP13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 ACSM4P0C7M7 580 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 PSMB9P28065 219 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 GSK3BP49841 420 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 IRF3Q14653 427 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 TMEM44Q2T9K0 475 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 TMEM52BQ4KMG9 183 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 FAM46CQ5VWP2 391 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 OR14C36Q8NHC7 312 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 RORBQ92753 470 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 SSX3Q99909 188 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 HDAC8Q9BY41 377 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 DCSTAMPQ9H295 470 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 ALG2Q9H553 416 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 ASF1AQ9Y294 204 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 HPGDSO60760 199 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 MT-ND1P03886 318 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 DNTTP04053 509 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 CSF2P04141 144 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 EFNA1P20827 205 aaPredicted RBP13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 ALDH9A1P49189 494 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 TEAD4Q15561 434 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 TMEM31Q5JXX7 168 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 DLEU7Q6UYE1 221 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 UBE2J2Q8N2K1 259 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 MED18Q9BUE0 208 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 PTDSS2Q9BVG9 487 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 SLC6A13Q9NSD5 602 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 VAPAQ9P0L0 249 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 SESN1Q9Y6P5 492 aa13.96□□□□□ -0.17
RPGRIP1-210ENST00000556336 LGALS8O00214 317 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 RASGRP1O95267 797 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 IGHV2-70P01814 119 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 HTR1AP08908 422 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 LTBRP36941 435 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 KIR2DL1P43626 348 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 RPS9P46781 194 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 RPS5P46782 204 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 RFX2P48378 723 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 GNG10P50151 68 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 DPTQ07507 201 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 ATRAIDQ6UW56 229 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 TMPRSS11BQ86T26 416 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 OR5AR1Q8NGP9 310 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 SLC13A3Q8WWT9 602 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 AURKBQ96GD4 344 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 UHRF1Q96T88 793 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 SPEGQ15772 3267 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 TNRC18O15417 2968 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 WBP4O75554 376 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 CD72P21854 359 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 RNF144AP50876 292 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 CDK3Q00526 305 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 PRMT9Q6P2P2 845 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 PLBD1Q6P4A8 553 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 NUDT18Q6ZVK8 323 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 L3MBTL4Q8NA19 623 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 C11orf65Q8NCR3 313 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 DTD1Q8TEA8 209 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 SFT2D1Q8WV19 159 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 SLC22A18Q96BI1 424 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 OR52E6Q96RD3 313 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 SLC29A3Q9BZD2 475 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 SGK2Q9HBY8 427 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 PCDHGB2Q9Y5G2 931 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 PCDHGA6Q9Y5G7 932 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 PCDHGA5Q9Y5G8 931 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 PCDHGA1Q9Y5H4 931 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 MAGEB17A8MXT2 336 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 SAP18O00422 153 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 ABCD4O14678 606 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 ETHE1O95571 254 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 GBAP04062 536 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 PRF1P14222 555 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 FPR3P25089 353 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 SMSP52788 366 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 CSTF1Q05048 431 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 SGCGQ13326 291 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 ZNF658BQ4V348 819 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 USP39Q53GS9 565 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 TMEM196Q5HYL7 178 aa13.95□□□□□ -0.18
RPGRIP1-210ENST00000556336 OTUD3Q5T2D3 398 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms