RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 ELSPBP1Q96BH3 223 aa2.51□□□□□ -2.01
SCFD1-216ENST00000555550 EPSTI1Q96J88 318 aa2.51□□□□□ -2.01
SCFD1-216ENST00000555550 MYOZ2Q9NPC6 264 aa2.51□□□□□ -2.01
SCFD1-216ENST00000555550 VPS54Q9P1Q0 977 aa2.51□□□□□ -2.01
SCFD1-216ENST00000555550 ERVK-18Q9QC07 812 aa2.51□□□□□ -2.01
SCFD1-216ENST00000555550 SLC2A6Q9UGQ3 507 aa2.51□□□□□ -2.01
SCFD1-216ENST00000555550 NRBP1Q9UHY1 535 aa2.51□□□□□ -2.01
SCFD1-216ENST00000555550 NPIPA5A0A0B4J1W7 369 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 MFSD2BA6NFX1 497 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 TRIM49D1C9J1S8 452 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 NPIPA5E9PKD4 350 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 C11orf98E9PRG8 122 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 KRTAP4-16G5E9R7 235 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-216ENST00000555550 CACNB4O00305 520 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-216ENST00000555550 CFLARO15519 480 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 EMC8O43402 210 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 RANBP6O60518 1105 aaKnown RBP2.5□□□□□ -2.01
SCFD1-216ENST00000555550 SFTPBP07988 381 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 FERP16591 822 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 ZNF17P17021 662 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 CTNNB1P35222 781 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 CD226Q15762 336 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 ZIC1Q15915 447 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 KYAT1Q16773 422 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 GLYR1Q49A26 553 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-216ENST00000555550 PRAMEF8Q5VWM4 474 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 TMED8Q6PL24 325 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-216ENST00000555550 SCARA5Q6ZMJ2 495 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 TGIF2LYQ8IUE0 185 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 PYROXD2Q8N2H3 581 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 SIDT2Q8NBJ9 832 aaKnown RBP2.5□□□□□ -2.01
SCFD1-216ENST00000555550 OR52J3Q8NH60 311 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 GOT1L1Q8NHS2 421 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-216ENST00000555550 RNF138Q8WVD3 245 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 CPXM1Q96SM3 734 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 TSPY26PQ9H489 355 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 ZWILCHQ9H900 591 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 COPS7BQ9H9Q2 264 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-216ENST00000555550 MAGEF1Q9HAY2 307 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 ACOXLQ9NUZ1 547 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 CA5BQ9Y2D0 317 aa2.5□□□□□ -2.01
SCFD1-216ENST00000555550 ZFP37Q9Y6Q3 630 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-216ENST00000555550 A0A0J9YVX5 310 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 A0A0U1RQK1 487 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 PINLYPA6NC86 204 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 GSTA1P08263 222 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 NR2C1P13056 603 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 ALDH3B2P48448 385 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 SLC26A2P50443 739 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 SMSP52788 366 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 METAP1P53582 386 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 HAND2P61296 217 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 BNIP1Q12981 228 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 PSG7Q13046 419 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 GK2Q14410 553 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-216ENST00000555550 EXOSC7Q15024 291 aaKnown RBP2.49□□□□□ -2.01
SCFD1-216ENST00000555550 ZNF658BQ4V348 819 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-216ENST00000555550 LINC00696Q6ZRV3 163 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 KCTD9Q7L273 389 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 MOB1BQ7L9L4 216 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 TSEN54Q7Z6J9 526 aaKnown RBP2.49□□□□□ -2.01
SCFD1-216ENST00000555550 ENTHD1Q8IYW4 607 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 MARC2Q969Z3 335 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 EBF4Q9BQW3 602 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 JPH2Q9BR39 696 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-216ENST00000555550 HCAR1Q9BXC0 346 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 CACNG6Q9BXT2 260 aa2.49□□□□□ -2.01
SCFD1-216ENST00000555550 AKIRIN1Q9H9L7 192 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-216ENST00000555550 EEF2KO00418 725 aaKnown RBP2.48□□□□□ -2.01
SCFD1-216ENST00000555550 SLC17A2O00624 439 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 ATP6V1G1O75348 118 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 NOL4O94818 638 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 H2AFZP0C0S5 128 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 VCLP18206 1134 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 MDKP21741 143 aaPredicted RBP2.48□□□□□ -2.01
SCFD1-216ENST00000555550 OR1D4P47884 311 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 ZNF85Q03923 595 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 TYSND1Q2T9J0 566 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 FUT11Q495W5 492 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 GPAT3Q53EU6 434 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 OTPQ5XKR4 325 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 ZCCHC12Q6PEW1 402 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 TFAP2EQ6VUC0 442 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 OR4A16Q8NH70 328 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 LHX4Q969G2 390 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 ADPGKQ9BRR6 497 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 APOOQ9BUR5 198 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 C19orf24Q9BVV8 132 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 TSSK1BQ9BXA7 367 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 HES7Q9BYE0 225 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 ZCCHC3Q9NUD5 404 aaKnown RBP2.48□□□□□ -2.01
SCFD1-216ENST00000555550 TRPC4Q9UBN4 977 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 PDE10AQ9Y233 779 aa2.48□□□□□ -2.01
SCFD1-216ENST00000555550 CHEK1O14757 476 aa2.47□□□□□ -2.01
SCFD1-216ENST00000555550 ZNF861PO60384 105 aa2.47□□□□□ -2.01
SCFD1-216ENST00000555550 PGK1P00558 417 aa2.47□□□□□ -2.01
SCFD1-216ENST00000555550 ASNSP08243 561 aa2.47□□□□□ -2.01
SCFD1-216ENST00000555550 UROSP10746 265 aa2.47□□□□□ -2.01
SCFD1-216ENST00000555550 ZP3P21754 424 aa2.47□□□□□ -2.01
SCFD1-216ENST00000555550 IGHV1-2P23083 117 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms