RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 KCNN2Q9H2S1 579 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 HCFC1R1Q9NWW0 138 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 FKBP7Q9Y680 259 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 CLCA3PQ9Y6N3 262 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 NUP210Q8TEM1 1887 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 DOCK6Q96HP0 2047 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 A0A1B0GVI7 797 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 TMEM202A6NGA9 273 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 WWP2O00308 870 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 CHP2O43745 196 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 TSPAN9O75954 239 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 C1orf105O95561 183 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC16A8O95907 504 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 CTSLP07711 333 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ANXA3P12429 323 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 POU3F3P20264 500 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 IL32P24001 234 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 EVI2BP34910 448 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 BDKRB1P46663 353 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 PREPP48147 710 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 DGKGP49619 791 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ST8SIA6P61647 398 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 HBA1P69905 142 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ACSM1Q08AH1 577 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF763Q0D2J5 394 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 GRK1Q15835 563 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 COX20Q5RI15 118 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 GPR139Q6DWJ6 353 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ANGPTL8Q6UXH0 198 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ADGRG3Q86Y34 549 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 OR52P1PQ8NH57 321 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 CYB5D2Q8WUJ1 264 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ZNF514Q96K75 400 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 SORCS2Q96PQ0 1159 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ATF6BQ99941 703 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 POLR2J3Q9H1A7 115 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 MED28Q9H204 178 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 LINC00597Q9H2U6 94 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 SLC28A3Q9HAS3 691 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 PRM3Q9NNZ6 103 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 CUEDC1Q9NWM3 386 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 ACAD8Q9UKU7 415 aa10.11□□□□□ -0.79
MTHFD1-210ENST00000555252 GNG14A0A1W2PPG7 69 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 CASKO14936 926 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 FABP7O15540 132 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 SOD1P00441 154 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 PRNPP04156 253 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 RHOP08100 348 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 C1GALT1C1LP0DN25 315 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ACP2P11117 423 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 IFI30P13284 250 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 CSF2RAP15509 400 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ELAVL4P26378 380 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 STOMP27105 288 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 RAG2P55895 527 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 RPS13P62277 151 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 HTRA4P83105 476 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 HSF2Q03933 536 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 GANABQ14697 944 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 TMEM44Q2T9K0 475 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ATAT1Q5SQI0 421 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 REEP3Q6NUK4 255 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 LUZP2Q86TE4 346 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 LRRC56Q8IYG6 542 aaPredicted RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ADGRF3Q8IZF5 1079 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 TCEANCQ8N8B7 351 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 SETD7Q8WTS6 366 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 TM9SF4Q92544 642 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 OTULINQ96BN8 352 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 C1GALT1C1Q96EU7 318 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 DTD2Q96FN9 168 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 SCMH1Q96GD3 660 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 COQ10AQ96MF6 247 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ZSWIM3Q96MP5 696 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 OR2M2Q96R28 347 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 SGPP1Q9BX95 441 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 PPA2Q9H2U2 334 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 GALNT9Q9HCQ5 603 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 B3GAT2Q9NPZ5 323 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 COMMD3Q9UBI1 195 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 CKAP5Q14008 2032 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 TRBV4-1A0A0J9YWV2 114 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 C17orf113A0A1B0GUU1 675 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ISM1B1AKI9 464 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 I3L521 148 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 CHST10O43529 356 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 ETHE1O95571 254 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 RECKO95980 971 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 HLA-DPB1P04440 258 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 RB1P06400 928 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 H1F0P07305 194 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 HNRNPA1P09651 372 aaKnown RBP eCLIP10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 LINC00271P0C7V0 271 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 EPHA4P54764 986 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 DSTNP60981 165 aa10.1□□□□□ -0.79
MTHFD1-210ENST00000555252 RPS25P62851 125 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms