RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 UBE2IP63279 158 aaKnown RBP10.46□□□□□ -0.73
SHMT2-216ENST00000554975 YBX1P67809 324 aaKnown RBP10.46□□□□□ -0.73
SHMT2-216ENST00000554975 RAPSNQ13702 412 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 KEAP1Q14145 624 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 PLCL1Q15111 1095 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 TRIM40Q6P9F5 258 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 NXPE4Q6UWF7 544 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 FAM83HQ6ZRV2 1179 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF621Q6ZSS3 439 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 CBLL1Q75N03 491 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 ANKRD46Q86W74 232 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 OFCC1Q8IZS5 231 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 GOT1L1Q8NHS2 421 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-216ENST00000554975 FAM110BQ8TC76 370 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 LZICQ8WZA0 190 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 ZNF566Q969W8 418 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 PPCDCQ96CD2 204 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 MTERF1Q99551 399 aaKnown RBP10.46□□□□□ -0.73
SHMT2-216ENST00000554975 APOL4Q9BPW4 351 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 INPP5KQ9BT40 448 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 TOR3AQ9H497 397 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 REEP1Q9H902 201 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 TPT1P8Q9HAU6 139 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 NEUROD4Q9HD90 331 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 IL1RAPQ9NPH3 570 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 POT1Q9NUX5 634 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 IMP3Q9NV31 184 aaKnown RBP10.46□□□□□ -0.73
SHMT2-216ENST00000554975 KIF17Q9P2E2 1029 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 ITGB1BP2Q9UKP3 347 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 WDR37Q9Y2I8 494 aa10.46□□□□□ -0.73
SHMT2-216ENST00000554975 CFAP20Q9Y6A4 193 aaKnown RBP10.46□□□□□ -0.73
SHMT2-216ENST00000554975 NUP210LQ5VU65 1888 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 PLOD2O00469 737 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 BCKDKO14874 412 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 TBX19O60806 448 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 PRAMEF4O60810 478 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ZG16O60844 167 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 SEC24DO94855 1032 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-216ENST00000554975 UBXN7O94888 489 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 MT-ND1P03886 318 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 GNAO1P09471 354 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ETS2P15036 469 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ITGA2P17301 1181 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 EEF1B2P24534 225 aaKnown RBP10.45□□□□□ -0.74
SHMT2-216ENST00000554975 DCKP27707 260 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 KDELR2P33947 212 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 RYKP34925 604 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 SOX11P35716 441 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 MAGEA8P43361 318 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 WNT3P56703 355 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 PPP1CAP62136 330 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 RPS13P62277 151 aaKnown RBP10.45□□□□□ -0.74
SHMT2-216ENST00000554975 PHC1P78364 1004 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 DMPKQ09013 629 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 PDE7AQ13946 482 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 GPR18Q14330 331 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 KRT33BQ14525 404 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 KCNAB1Q14722 419 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 RPE65Q16518 533 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ZXDCQ2QGD7 858 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-216ENST00000554975 CRB2Q5IJ48 1285 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 GCNT6Q5T4J0 391 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 PRAMEF9Q5VWM5 478 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 LCN10Q6JVE6 187 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 WASH2PQ6VEQ5 465 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ZNF517Q6ZMY9 492 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-216ENST00000554975 FAM92BQ6ZTR7 304 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 C17orf64Q86WR6 236 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 PPP1R3BQ86XI6 285 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ZC3H7AQ8IWR0 971 aaKnown RBP10.45□□□□□ -0.74
SHMT2-216ENST00000554975 CFAP206Q8IYR0 622 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 METTL4Q8N3J2 472 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 TTLQ8NG68 377 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 OR7A2PQ8NGA2 310 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 OR52N2Q8NGI0 321 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 OR4A15Q8NGL6 344 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 RSC1A1Q92681 617 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 NEIL2Q969S2 332 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 POM121Q96HA1 1249 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 C12orf66Q96MD2 445 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 OR4K3Q96R72 315 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ZNF347Q96SE7 839 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 EPYCQ99645 322 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 AIF1LQ9BQI0 150 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 TMEM38AQ9H6F2 299 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 NT5DC2Q9H857 520 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 WASH6PQ9NQA3 447 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ACSL5Q9ULC5 683 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ANGPT4Q9Y264 503 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 ASF1AQ9Y294 204 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 PCDHGB7Q9Y5F8 929 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 PCDHGB5Q9Y5G0 923 aa10.45□□□□□ -0.74
SHMT2-216ENST00000554975 CACNA1CQ13936 2221 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 MYOCOSA0A1B0GUC4 107 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 A8MVJ9 347 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 PRSS44E7EML9 344 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 LRRTM2O43300 516 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 SCN2BO60939 215 aa10.44□□□□□ -0.74
SHMT2-216ENST00000554975 CPSF4O95639 269 aaKnown RBP10.44□□□□□ -0.74
SHMT2-216ENST00000554975 SEMG1P04279 462 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms