RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ACVR2AP27037 513 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 MLLT3P42568 568 aaPredicted RBP16.33■□□□□ 0.21
SHOX-204ENST00000554971 PPP1R8Q12972 351 aaKnown RBP16.33■□□□□ 0.21
SHOX-204ENST00000554971 COL9A2Q14055 689 aaPredicted RBP16.33■□□□□ 0.21
SHOX-204ENST00000554971 ZNF630Q2M218 657 aaPredicted RBP16.33■□□□□ 0.21
SHOX-204ENST00000554971 MLIPQ5VWP3 458 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 FRMPD2BQ6IN97 320 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 FAM71E1Q6IPT2 247 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 VTCN1Q7Z7D3 282 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 KRT78Q8N1N4 520 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 ATG16L2Q8NAA4 619 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 MIPOL1Q8TD10 442 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 PPCDCQ96CD2 204 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 ZNF501Q96CX3 271 aaPredicted RBP16.33■□□□□ 0.21
SHOX-204ENST00000554971 OR6C1Q96RD1 312 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 PITHD1Q9GZP4 211 aaPredicted RBP16.33■□□□□ 0.21
SHOX-204ENST00000554971 NECTIN3Q9NQS3 549 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 FGF21Q9NSA1 209 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 B3GNT3Q9Y2A9 372 aa16.33■□□□□ 0.21
SHOX-204ENST00000554971 PTGES3LE9PB15 166 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 SLC22A1O15245 554 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 MITFO75030 526 aaPredicted RBP16.33■□□□□ 0.2
SHOX-204ENST00000554971 ANXA8P13928 327 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 GABREP78334 506 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 MC2RQ01718 297 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 EMX1Q04741 257 aaPredicted RBP16.33■□□□□ 0.2
SHOX-204ENST00000554971 NPRL3Q12980 569 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 MAD2L1BPQ15013 274 aaPredicted RBP16.33■□□□□ 0.2
SHOX-204ENST00000554971 GCNT6Q5T4J0 391 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 SYT6Q5T7P8 510 aaPredicted RBP16.33■□□□□ 0.2
SHOX-204ENST00000554971 RNF44Q7L0R7 432 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 OR10Q1Q8NGQ4 319 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 HRASLS5Q96KN8 279 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 CTRCQ99895 268 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 DPH2Q9BQC3 489 aaPredicted RBP16.33■□□□□ 0.2
SHOX-204ENST00000554971 THSD1Q9NS62 852 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 GALNT8Q9NY28 637 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 PISDQ9UG56 409 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 EXO1Q9UQ84 846 aaKnown RBP16.33■□□□□ 0.2
SHOX-204ENST00000554971 MSRB2Q9Y3D2 182 aa16.33■□□□□ 0.2
SHOX-204ENST00000554971 HEMK1Q9Y5R4 338 aaPredicted RBP16.33■□□□□ 0.2
SHOX-204ENST00000554971 LOC105369274A0A096LPK9 316 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 LOC102723532A0A0G2JNH3 316 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 TRABD2BA6NFA1 517 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 B4E171 279 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 LCMT2O60294 686 aaKnown RBP16.32■□□□□ 0.2
SHOX-204ENST00000554971 TBX19O60806 448 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 TIAF1O95411 115 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 EFNA1P20827 205 aaPredicted RBP16.32■□□□□ 0.2
SHOX-204ENST00000554971 CXCR2P25025 360 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 TSPAN7P41732 249 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 GSTM5P46439 218 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 MVDP53602 400 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 NPTX1Q15818 432 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 IFI44LQ53G44 452 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 Q6ZNX1 250 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 PRSS48Q7RTY5 328 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 OR4N4Q8N0Y3 316 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 C16orf78Q8WTQ4 265 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 FAR1Q8WVX9 515 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 RNF31Q96EP0 1072 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 RUBCNLQ9H714 662 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 PRM3Q9NNZ6 103 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 FBXO8Q9NRD0 319 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 TMEM184CQ9NVA4 438 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 TAS2R9Q9NYW1 312 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 ATMQ13315 3056 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 CCDC88CQ9P219 2028 aa16.32■□□□□ 0.2
SHOX-204ENST00000554971 URB1O60287 2271 aaKnown RBP16.32■□□□□ 0.2
SHOX-204ENST00000554971 FEZF1A0PJY2 475 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 C9orf172C9J069 976 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 BCAS1O75363 584 aaPredicted RBP16.31■□□□□ 0.2
SHOX-204ENST00000554971 SEMA3DO95025 777 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 GABARAPO95166 117 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 JMJD7P0C870 316 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 ZNF182P17025 639 aaPredicted RBP16.31■□□□□ 0.2
SHOX-204ENST00000554971 ARL4DP49703 201 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 MAPK10P53779 464 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 SHC2P98077 582 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 GAB1Q13480 694 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 CRB2Q5IJ48 1285 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 PRAMEF17Q5VTA0 474 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 ADCK2Q7Z695 626 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 GALNT5Q7Z7M9 940 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 OR1L3Q8NH93 324 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 CNIH3Q8TBE1 160 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 GIPC3Q8TF64 312 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 FCGR1BQ92637 280 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 TPD52L3Q96J77 140 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 SLC46A1Q96NT5 459 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 OR2A5Q96R48 311 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 BARD1Q99728 777 aaKnown RBP16.31■□□□□ 0.2
SHOX-204ENST00000554971 NRSN2Q9GZP1 204 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 EPS8L2Q9H6S3 715 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 ASCL3Q9NQ33 180 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 PLCXD1Q9NUJ7 323 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 PAK1IP1Q9NWT1 392 aaPredicted RBP16.31■□□□□ 0.2
SHOX-204ENST00000554971 ANKMY1Q9P2S6 941 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 ENOPH1Q9UHY7 261 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 SNX7Q9UNH6 387 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms