RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 DLG1Q12959 904 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 GAB1Q13480 694 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 ZKSCAN8Q15776 578 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-209ENST00000553308 C6orf163Q5TEZ5 329 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 SLC30A6Q6NXT4 461 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 TMEM81Q6P7N7 255 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 ZNF474Q6S9Z5 364 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-209ENST00000553308 C20orf204Q6ZNR8 217 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 ZNF550Q7Z398 422 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 IFNEQ86WN2 208 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 NUDT13Q86X67 352 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 SLC35F6Q8N357 371 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 TEX9Q8N6V9 391 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 WDSUB1Q8N9V3 476 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 C17orf47Q8NEP4 570 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 STARD4Q96DR4 205 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 OMA1Q96E52 524 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 ZC3HAV1LQ96H79 300 aaKnown RBP8.23□□□□□ -1.09
SYNE2-209ENST00000553308 MARK4Q96L34 752 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 FAM111AQ96PZ2 611 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 ATOH8Q96SQ7 321 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 RBBP8Q99708 897 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 ITPAQ9BY32 194 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 GSX2Q9BZM3 304 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 TRIM31Q9BZY9 425 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 OPN3Q9H1Y3 402 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-209ENST00000553308 ACTR8Q9H981 624 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 ZNF226Q9NYT6 803 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 TAS2R10Q9NYW0 307 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 HEY2Q9UBP5 337 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 EXO1Q9UQ84 846 aaKnown RBP8.23□□□□□ -1.09
SYNE2-209ENST00000553308 TSC22D4Q9Y3Q8 395 aa8.23□□□□□ -1.09
SYNE2-209ENST00000553308 DSCAMO60469 2012 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 PRAMEF25A6NGN4 478 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 LRRC14BA6NHZ5 514 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 E7ESA3 106 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 KERAO60938 352 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 CRLF1O75462 422 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 CBR3O75828 277 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 SEC31AO94979 1220 aaKnown RBP8.22□□□□□ -1.09
SYNE2-209ENST00000553308 CPMP14384 443 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 ZNF708P17019 499 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 CHMP24386 653 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 PTX3P26022 381 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-209ENST00000553308 SSTR1P30872 391 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 UGT2B10P36537 528 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 PIK3CGP48736 1102 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 XKP51811 444 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 NEK2P51955 445 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 ARFIP1P53367 373 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 RAB10P61026 200 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 SIRPAP78324 504 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 PHEXP78562 749 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 CUL3Q13618 768 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 EXOSC7Q15024 291 aaKnown RBP8.22□□□□□ -1.09
SYNE2-209ENST00000553308 FAM111BQ6SJ93 734 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 C22orf34Q6ZV56 151 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 NUP54Q7Z3B4 507 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 P4HA3Q7Z4N8 544 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 BTLAQ7Z6A9 289 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 CMC1Q7Z7K0 106 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 ISCA2Q86U28 154 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 LRRC8AQ8IWT6 810 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 KLHL7Q8IXQ5 586 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 ZBED8Q8IZ13 594 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 CNEP1R1Q8N9A8 125 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 OR7G1Q8NGA0 311 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 OR4K14Q8NGD5 310 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 STAG3L4Q8TBR4 150 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 IGFBPL1Q8WX77 278 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 SFXN2Q96NB2 322 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 BRINP2Q9C0B6 783 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 FBXL2Q9UKC9 423 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 SNX12Q9UMY4 172 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 DLGAP4Q9Y2H0 992 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 ANGPTL3Q9Y5C1 460 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 PCDHGA11Q9Y5H2 935 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 FBN1P35555 2871 aaKnown RBP8.22□□□□□ -1.09
SYNE2-209ENST00000553308 CHD3Q12873 2000 aaKnown RBP8.22□□□□□ -1.09
SYNE2-209ENST00000553308 TLN2Q9Y4G6 2542 aa8.22□□□□□ -1.09
SYNE2-209ENST00000553308 SLC22A20A6NK97 555 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 C17orf51A8MQB3 221 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 B4DXG7 233 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 H0YIV9 168 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 MTHFD2P13995 350 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 POU2F1P14859 743 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 NAGAP17050 411 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 SRD5A2P31213 254 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 GP5P40197 560 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 KIR2DL2P43627 348 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-209ENST00000553308 PCYT1AP49585 367 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 NR1H2P55055 460 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 EEF1A1P68104 462 aaKnown RBP8.21□□□□□ -1.1
SYNE2-209ENST00000553308 HMGCS1Q01581 520 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 DR1Q01658 176 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 MGAT2Q10469 447 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 ILF2Q12905 390 aaKnown RBP8.21□□□□□ -1.1
SYNE2-209ENST00000553308 SNTA1Q13424 505 aa8.21□□□□□ -1.1
SYNE2-209ENST00000553308 CAPRIN1Q14444 709 aaKnown RBP8.21□□□□□ -1.1
SYNE2-209ENST00000553308 CPSF6Q16630 551 aaKnown RBP eCLIP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms