RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TAGAPQ8N103 731 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 OR52R1Q8NGF1 315 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 OR9A2Q8NGT5 310 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 AENQ8WTP8 325 aaKnown RBP11.93□□□□□ -0.5
NPAS3-209ENST00000551008 DIO2Q92813 273 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 KAT2AQ92830 837 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 EXOSC8Q96B26 276 aaKnown RBP11.93□□□□□ -0.5
NPAS3-209ENST00000551008 CCDC126Q96EE4 140 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 ZNF597Q96LX8 424 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 DOHHQ9BU89 302 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 FAIM2Q9BWQ8 316 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 GATA5Q9BWX5 397 aaPredicted RBP11.93□□□□□ -0.5
NPAS3-209ENST00000551008 SHCBP1LQ9BZQ2 653 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 ENKD1Q9H0I2 346 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 TUBB1Q9H4B7 451 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 ACKR4Q9NPB9 350 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 NMRK1Q9NWW6 199 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 MKS1Q9NXB0 559 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 GRID1Q9ULK0 1009 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 BOKQ9UMX3 212 aaPredicted RBP11.93□□□□□ -0.5
NPAS3-209ENST00000551008 STK38LQ9Y2H1 464 aa11.93□□□□□ -0.5
NPAS3-209ENST00000551008 TRGV5A0A0B4J1U4 118 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 BCKDKO14874 412 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 TO15178 435 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 HCN1O60741 890 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 CDH16O75309 829 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 UGT2B11O75310 529 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 PPM1BO75688 479 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 TOXO94900 526 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 NUDT17P0C025 328 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 CT45A8P0DMV1 189 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 CT45A9P0DMV2 189 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 GLI4P10075 376 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 CPA3P15088 417 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 TACR1P25103 407 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 ACVR2AP27037 513 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 ARRB2P32121 409 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 DEKP35659 375 aaKnown RBP11.92□□□□□ -0.5
NPAS3-209ENST00000551008 TRPC1P48995 793 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 MAN2A2P49641 1150 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 PMPCAQ10713 525 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 CCDC153Q494R4 210 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 CT45A2Q5DJT8 189 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 CLEC6AQ6EIG7 209 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 TMEM81Q6P7N7 255 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 TRABD2AQ86V40 505 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 LIX1LQ8IVB5 337 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 C10orf107Q8IVU9 208 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 SRRM1Q8IYB3 904 aaKnown RBP11.92□□□□□ -0.5
NPAS3-209ENST00000551008 OR7G2Q8NG99 324 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 OR2T11Q8NH01 316 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 NEIL3Q8TAT5 605 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 RDH11Q8TC12 318 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 RNF138Q8WVD3 245 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 OMA1Q96E52 524 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 LCORQ96JN0 433 aaPredicted RBP11.92□□□□□ -0.5
NPAS3-209ENST00000551008 FCRL1Q96LA6 429 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 VSTM2LQ96N03 204 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 BTBD9Q96Q07 612 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 SECISBP2Q96T21 854 aaKnown RBP11.92□□□□□ -0.5
NPAS3-209ENST00000551008 TTYH2Q9BSA4 534 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 UCK2Q9BZX2 261 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 PPCSQ9HAB8 311 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 CHST11Q9NPF2 352 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 SLC35C2Q9NQQ7 365 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 QPCTLQ9NXS2 382 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 EHD3Q9NZN3 535 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 BCAP29Q9UHQ4 241 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 GPR55Q9Y2T6 319 aaPredicted RBP11.92□□□□□ -0.5
NPAS3-209ENST00000551008 C15orf41Q9Y2V0 281 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 POLR3HQ9Y535 204 aaPredicted RBP11.92□□□□□ -0.5
NPAS3-209ENST00000551008 SPG11Q96JI7 2443 aa11.92□□□□□ -0.5
NPAS3-209ENST00000551008 ANKHD1Q8IWZ3 2542 aaKnown RBP11.91□□□□□ -0.5
NPAS3-209ENST00000551008 A0A0G2JNJ9 132 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 GNG14A0A1W2PPG7 69 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 NKX2-6A6NCS4 301 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 C17orf51A8MQB3 221 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 MYO1GB0I1T2 1018 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 NPIPB8E9PQR5 432 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 COPEO14579 308 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 ANXA4P09525 319 aaPredicted RBP11.91□□□□□ -0.5
NPAS3-209ENST00000551008 CREB1P16220 341 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 NAGAP17050 411 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 PTPN6P29350 595 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 PTGER4P35408 488 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 PPICP45877 212 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 CDK9P50750 372 aaKnown RBP11.91□□□□□ -0.5
NPAS3-209ENST00000551008 CORO7P57737 925 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 KRTAP10-9P60411 292 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 CRYZQ08257 329 aaKnown RBP11.91□□□□□ -0.5
NPAS3-209ENST00000551008 ZNF763Q0D2J5 394 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 DCST1Q5T197 706 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 LIPMQ5VYY2 423 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 HLA-DQA1Q5Y7H0 255 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 ZNF585AQ6P3V2 769 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 PAOXQ6QHF9 649 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 CNPY4Q8N129 248 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 BANPQ8N9N5 519 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 LILRB4Q8NHJ6 448 aa11.91□□□□□ -0.5
NPAS3-209ENST00000551008 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms