RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 CRYZQ08257 329 aaKnown RBP14.19□□□□□ -0.14
CUX1-214ENST00000550008 GGTA1PQ4G0N0 100 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 OR8J2Q8NGG1 315 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 TOE1Q96GM8 510 aaKnown RBP14.19□□□□□ -0.14
CUX1-214ENST00000550008 ERMAPQ96PL5 475 aaPredicted RBP14.19□□□□□ -0.14
CUX1-214ENST00000550008 OR51E2Q9H255 320 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ACTR10Q9NZ32 417 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 LIPT1Q9Y234 373 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 SLC5A10A0PJK1 596 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 CLCA1A8K7I4 914 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 KIAA0355O15063 1070 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 PROM1O43490 865 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 COQ9O75208 318 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ITGB8P26012 769 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ACSL1P33121 698 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 RAB14P61106 215 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ALG11Q2TAA5 492 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 PROX2Q3B8N5 592 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ANKDD1AQ495B1 522 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 SLC36A4Q6YBV0 504 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 SPRED1Q7Z699 444 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 PTRH1Q86Y79 214 aaKnown RBP14.19□□□□□ -0.14
CUX1-214ENST00000550008 OR8K3Q8NH51 312 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 OR56A3Q8NH54 315 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 FANK1Q8TC84 345 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 SLC38A5Q8WUX1 472 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 SGCDQ92629 289 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 TRIM63Q969Q1 353 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ARSGQ96EG1 525 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 CCDC115Q96NT0 180 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 SPATA9Q9BWV2 254 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 CENPMQ9NSP4 180 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ERVK13-1Q9NX77 482 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 TAS2R16Q9NYV7 291 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ZDBF2Q9HCK1 2354 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 PSMD9O00233 223 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 FURINP09958 794 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 CDK4P11802 303 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 RPE65Q16518 533 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ANKRD54Q6NXT1 300 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 ZFP90Q8TF47 636 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 OSTF1Q92882 214 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 TMEM45AQ9NWC5 275 aa14.19□□□□□ -0.14
CUX1-214ENST00000550008 GFYI3L273 518 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 HCRTR2O43614 444 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 ACVR1BP36896 505 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 SOX3P41225 446 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 LTB4RQ15722 352 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 DECR1Q16698 335 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 ZFP69Q49AA0 526 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 B3GNT8Q7Z7M8 397 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 VRK2Q86Y07 508 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 HMGCLL1Q8TB92 370 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 LYSMD1Q96S90 227 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 TUBA1CQ9BQE3 449 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 TRIM2Q9C040 744 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 RACGAP1Q9H0H5 632 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 FGF22Q9HCT0 170 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 SLC6A13Q9NSD5 602 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 GPN3Q9UHW5 284 aaPredicted RBP14.18□□□□□ -0.14
CUX1-214ENST00000550008 TSPAN9O75954 239 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 GNSP15586 552 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 CA5AP35218 305 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 PSMD4P55036 377 aaKnown RBP14.18□□□□□ -0.14
CUX1-214ENST00000550008 OR12D2P58182 307 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 E2F2Q14209 437 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 PON3Q15166 354 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 B3GLCTQ6Y288 498 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 SHISA6Q6ZSJ9 500 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 ZNF676Q8N7Q3 588 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 PPP1R14BQ96C90 147 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 USP36Q9P275 1121 aaKnown RBP14.18□□□□□ -0.14
CUX1-214ENST00000550008 MBD1Q9UIS9 605 aaPredicted RBP14.18□□□□□ -0.14
CUX1-214ENST00000550008 PRAMEF33A0A0G2JMD5 474 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 POM121BA6NF01 834 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 FAM183AA6NL82 134 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 SCO2O43819 266 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 PRAMEF10O60809 474 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 PYCR1P32322 319 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 SOX2P48431 317 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 DCDC1P59894 354 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 PLBD1Q6P4A8 553 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 KLBQ86Z14 1044 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 OR2T33Q8NG76 320 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 MOSPD2Q8NHP6 518 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 GNPDA2Q8TDQ7 276 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 ALG14Q96F25 216 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 PHOX2BQ99453 314 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 DPH1Q9BZG8 443 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 ZBTB20Q9HC78 741 aaPredicted RBP14.18□□□□□ -0.14
CUX1-214ENST00000550008 RLIMQ9NVW2 624 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 LTBP1Q14766 1721 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 ARID1AO14497 2285 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 WBP4O75554 376 aaKnown RBP14.18□□□□□ -0.14
CUX1-214ENST00000550008 ADAP00813 363 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 RNH1P13489 461 aaKnown RBP14.18□□□□□ -0.14
CUX1-214ENST00000550008 EIF1AXP47813 144 aaKnown RBP14.18□□□□□ -0.14
CUX1-214ENST00000550008 ZNF33BQ06732 778 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 LCN1P1Q5VSP4 162 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 TMEM215Q68D42 235 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms