RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RNF222A6NCQ9 220 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 HNRNPCL2B2RXH8 293 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 E9PMD0 336 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 H3BTX0 84 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 BOLA2-SMG1P6H3BVE0 249 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 SGK494L7N484 410 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PES1O00541 588 aaKnown RBP3.76□□□□□ -1.81
SCAF11-210ENST00000547654 SDHDO14521 159 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 CTAGE5O15320 804 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 MLNRO43193 412 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 BUB3O43684 328 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 CTSVO60911 334 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 ECI2O75521 394 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 KRT36O76013 467 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 AGTP01019 485 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 NR3C1P04150 777 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 GSTA1P08263 222 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 GSTT2P0CG29 244 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 GSTT2BP0CG30 244 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PRKAR1AP10644 381 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 ANXA8P13928 327 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 TSPAN8P19075 237 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 MSH3P20585 1137 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PRELPP51888 382 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 DLX5P56178 289 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 OSTNP61366 133 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 HERV-K104P61576 105 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 RPL24P83731 157 aaKnown RBP3.76□□□□□ -1.81
SCAF11-210ENST00000547654 SRYQ05066 204 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PJVKQ0ZLH3 352 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 SQLEQ14534 574 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PARP6Q2NL67 630 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PDLIM3Q53GG5 364 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-210ENST00000547654 ARMC12Q5T9G4 340 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 ANXA8L1Q5VT79 327 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PRAMEF20Q5VT98 475 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 C1orf189Q5VU69 101 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 TMEM225Q6GV28 225 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 SYT10Q6XYQ8 523 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 Q6ZPB1 254 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-210ENST00000547654 KCTD8Q6ZWB6 473 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 C5orf24Q7Z6I8 188 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 LHFPL4Q7Z7J7 247 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 GPC2Q8N158 579 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 TEX26Q8N6G2 289 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 TCEANCQ8N8B7 351 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 CCDC148Q8NFR7 591 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 GPR148Q8TDV2 347 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 SPRYD4Q8WW59 207 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-210ENST00000547654 AKR1E2Q96JD6 320 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 DUX5Q96PT3 197 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 NEDD4LQ96PU5 975 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 USP28Q96RU2 1077 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 IL12RB2Q99665 862 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 NPAS2Q99743 824 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 TMEM43Q9BTV4 400 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PNNQ9H307 717 aaKnown RBP3.76□□□□□ -1.81
SCAF11-210ENST00000547654 CLSTN2Q9H4D0 955 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 MEAF6Q9HAF1 191 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 UBE2TQ9NPD8 197 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-210ENST00000547654 AGPAT5Q9NUQ2 364 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 C1orf123Q9NWV4 160 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 BARHL2Q9NY43 387 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 FLRT3Q9NZU0 649 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 HACD3Q9P035 362 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 SEC14L3Q9UDX4 400 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 CRLS1Q9UJA2 301 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PRDM4Q9UKN5 801 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 PSME2Q9UL46 239 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 NAP1L2Q9ULW6 460 aaPredicted RBP3.76□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF175Q9Y473 711 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 AP4B1Q9Y6B7 739 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 KIDINS220Q9ULH0 1771 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 KANK1Q14678 1352 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 TNS1Q9HBL0 1735 aaKnown RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 KIAA1210Q9ULL0 1709 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ABCC1P33527 1531 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 TTC41PQ6P2S7 1318 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 KDM5AP29375 1690 aaKnown RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ARHGEF35A5YM69 484 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 NCF1BA6NI72 391 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 NCF1CA8MVU1 366 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 TCP10L2B9ZVM9 353 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF587BE7ETH6 402 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 CASC3O15234 703 aaKnown RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 GLRA3O75311 464 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 KRT33AO76009 404 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 CHRNA1P02708 482 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 FGF4P08620 206 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 PNMTP11086 282 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 CYP11B1P15538 503 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 HNF1AP20823 631 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 RFC4P35249 363 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 CAPGP40121 348 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 GRIA1P42261 906 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 FUT6P51993 359 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 DCDC1P59894 354 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 MFGE8Q08431 387 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 GAGE5Q13069 117 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms