RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 STARD7Q9NQZ5 370 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM184CQ9NVA4 438 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 RLIMQ9NVW2 624 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 RBFOX1Q9NWB1 397 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 QPCTLQ9NXS2 382 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SPG21Q9NZD8 308 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TBC1D14Q9P2M4 693 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 P2RX2Q9UBL9 471 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 AASSQ9UDR5 926 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TESQ9UGI8 421 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SUSD2Q9UGT4 822 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 PCDHB10Q9UN67 800 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 GPR34Q9UPC5 381 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 EXO1Q9UQ84 846 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SCN8AQ9UQD0 1980 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 INSL5Q9Y5Q6 135 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 MAU2Q9Y6X3 613 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 CASP8AP2Q9UKL3 1982 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 GSAPA4D1B5 854 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ADAM12O43184 909 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 AKAP8O43823 692 aaKnown RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 OR10H3O60404 316 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ETHE1O95571 254 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 SLC16A8O95907 504 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 CYP17A1P05093 508 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 HMGN1P05114 100 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TSPAN19P0C672 248 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ERGP11308 486 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 PEPDP12955 493 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 NPPBP16860 134 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 LAG3P18627 525 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 POU3F3P20264 500 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 XPAP23025 273 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TCEA1P23193 301 aaKnown RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 AQP1P29972 269 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 PKLRP30613 574 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 PPM1AP35813 382 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TGFBR1P36897 503 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 NR4A2P43354 598 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 STK19P49842 368 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 GZMKP49863 264 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 KHKP50053 298 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 RAG2P55895 527 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TAS2R50P59544 299 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TBPL1P62380 186 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 CDK5Q00535 292 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 PTPRRQ15256 657 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF79Q15937 498 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF385BQ569K4 471 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF805Q5CZA5 627 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 SLC6A19Q695T7 634 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TCTN3Q6NUS6 607 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 C1orf94Q6P1W5 598 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 PGBD2Q6P3X8 592 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 BAIAP2L2Q6UXY1 529 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TMIGD1Q6UXZ0 262 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 CEACAM20Q6UY09 585 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 DPY19L3Q6ZPD9 716 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 USP30Q70CQ3 517 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ARMCX6Q7L4S7 300 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TAS1R1Q7RTX1 841 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 NANOGNBQ7Z5D8 188 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 GALNT10Q86SR1 603 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 TMPRSS11BQ86T26 416 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 SLC9B2Q86UD5 537 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 THNSL2Q86YJ6 484 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 NLGN4XQ8N0W4 816 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 SLC43A2Q8N370 569 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 CLIP4Q8N3C7 705 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ARL14EPQ8N8R7 260 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 OR6K2Q8NGY2 324 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 OR52N1Q8NH53 320 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 OR52J3Q8NH60 311 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 SUN3Q8TAQ9 357 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF417Q8TAU3 575 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 GNPDA2Q8TDQ7 276 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 WFIKKN2Q8TEU8 576 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF480Q8WV37 535 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 SMPDL3AQ92484 453 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 NEIL2Q969S2 332 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 WBP2Q969T9 261 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 VOPP1Q96AW1 172 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 RAD51AP1Q96B01 352 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 CREB3L1Q96BA8 519 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 OTUB1Q96FW1 271 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 MED8Q96G25 268 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 DIRAS2Q96HU8 199 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 HHIPL1Q96JK4 782 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 RNF170Q96K19 258 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 PRRC1Q96M27 445 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF587Q96SQ5 575 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 NELL2Q99435 816 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 MYOCQ99972 504 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 AIF1LQ9BQI0 150 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 C7orf50Q9BRJ6 194 aaKnown RBP6.11□□□□□ -1.43
SNHG1-225ENST00000545920 MARVELD1Q9BSK0 173 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 BARHL1Q9BZE3 327 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 BTBD1Q9H0C5 482 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 KCNN2Q9H2S1 579 aa6.11□□□□□ -1.43
SNHG1-225ENST00000545920 ZDHHC6Q9H6R6 413 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms