RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 OR10G3Q8NGC4 313 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 OR52R1Q8NGF1 315 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 CDC26Q8NHZ8 85 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 PPP1R14CQ8TAE6 165 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.87□□□□□ -0.67
HDAC4-216ENST00000544989 DIO2Q92813 273 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 CCDC120Q96HB5 630 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 ZNF597Q96LX8 424 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 DOHHQ9BU89 302 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 TP63Q9H3D4 680 aaPredicted RBP10.87□□□□□ -0.67
HDAC4-216ENST00000544989 SLC17A7Q9P2U7 560 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 MEMO1Q9Y316 297 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 TRAF6Q9Y4K3 522 aa10.87□□□□□ -0.67
HDAC4-216ENST00000544989 CROCCQ5TZA2 2017 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 A0A1B0GTH9 108 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 A0A1B0GVC2 190 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 A1L4Q6 167 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 TTC36A6NLP5 189 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 FAM166BA8MTA8 275 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 MYO1GB0I1T2 1018 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 TMEM114B3SHH9 223 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 TO15178 435 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 BIRC5O15392 142 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 PPM1BO75688 479 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 CBX7O95931 251 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 BPGMP07738 259 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 HOXD4P09016 255 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-216ENST00000544989 RNF224P0DH78 156 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 PCSK2P16519 638 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 KRT20P35900 424 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 RPL3P39023 403 aaKnown RBP10.86□□□□□ -0.67
HDAC4-216ENST00000544989 DNASE1L1P49184 302 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 PLCXD2Q0VAA5 305 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 ARL13AQ5H913 290 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-216ENST00000544989 FAM111BQ6SJ93 734 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 R3HCC1LQ7Z5L2 792 aaKnown RBP10.86□□□□□ -0.67
HDAC4-216ENST00000544989 TICAM1Q8IUC6 712 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 NUDCD3Q8IVD9 361 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 DDIASQ8IXT1 998 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 TMEM251Q8N6I4 163 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 ADCY4Q8NFM4 1077 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 OR52N2Q8NGI0 321 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 SPPL2AQ8TCT8 520 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 DOK4Q8TEW6 326 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 TWIST2Q8WVJ9 160 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 SARAFQ96BY9 339 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 TMCO6Q96DC7 493 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 PPP3R2Q96LZ3 170 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 ZIM3Q96PE6 472 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 BTBD9Q96Q07 612 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 LDAHQ9H6V9 325 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 RUBCNLQ9H714 662 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 CHST11Q9NPF2 352 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 TUBA8Q9NY65 449 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-216ENST00000544989 SH3BGRL2Q9UJC5 107 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 TINAGQ9UJW2 476 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 CNOT11Q9UKZ1 510 aaKnown RBP10.86□□□□□ -0.67
HDAC4-216ENST00000544989 CCL27Q9Y4X3 112 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 POLR3HQ9Y535 204 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-216ENST00000544989 DNAJC15Q9Y5T4 150 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 PDZD2O15018 2839 aa10.86□□□□□ -0.67
HDAC4-216ENST00000544989 NF1P21359 2839 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 A0A0G2JMM0 328 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 A0A1W2PPB8 328 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 A0A1W2PRS3 328 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 PINLYPA6NC86 204 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 FIGNL2A6NMB9 653 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 KIR3DP1A8MWS1 328 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 FAM47E-STBD1D6RA91 191 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 G3V3Y1 287 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 PLOD2O00469 737 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 AQP7O14520 342 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 TBX19O60806 448 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 ZWINTO95229 277 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 CLDN1O95832 211 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 TPOP07202 933 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 ABCB1P08183 1280 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-216ENST00000544989 ELAVL4P26378 380 aaKnown RBP10.85□□□□□ -0.67
HDAC4-216ENST00000544989 PIGAP37287 484 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 ETV4P43268 484 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 MAGEA5P43359 124 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 MASP1P48740 699 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 MAN2A2P49641 1150 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 EMDP50402 254 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 NCBP2P52298 156 aaKnown RBP eCLIP10.85□□□□□ -0.674e-7■■■□□ 17.3
HDAC4-216ENST00000544989 FBXW4P57775 412 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 EFR3AQ14156 821 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 EXOSC7Q15024 291 aaKnown RBP10.85□□□□□ -0.67
HDAC4-216ENST00000544989 KIAA0040Q15053 153 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 ZNHIT3Q15649 155 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-216ENST00000544989 TRMT12Q53H54 448 aaKnown RBP10.85□□□□□ -0.67
HDAC4-216ENST00000544989 SH2D4BQ5SQS7 431 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 CEP85LQ5SZL2 805 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 PRAMEF20Q5VT98 475 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 SLC30A6Q6NXT4 461 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 Q6ZSR9 355 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 TRILQ7L0X0 811 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 MRGPRGQ86SM5 289 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 CD163Q86VB7 1156 aa10.85□□□□□ -0.67
HDAC4-216ENST00000544989 DOLPP1Q86YN1 238 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms