RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TBC1D3KA0A087X1G2 549 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 TBC1D3FA6NER0 549 aaPredicted RBP12.27□□□□□ -0.44
CPSF7-223ENST00000544669 ERI3O43414 337 aaKnown RBP12.27□□□□□ -0.44
CPSF7-223ENST00000544669 B4GALT2O60909 372 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 HMGN2P05204 90 aaKnown RBP12.27□□□□□ -0.44
CPSF7-223ENST00000544669 CCNYL3P0C7X3 344 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 GABRA5P31644 462 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 SDC2P34741 201 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 VIPR2P41587 438 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 IL12RB1P42701 662 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 MTNR1AP48039 350 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 RGS1Q08116 209 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 GAB4Q2WGN9 574 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 UAP1L1Q3KQV9 507 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 EIPR1Q53HC9 387 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 PDZK1Q5T2W1 519 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 TBC1D3GQ6DHY5 549 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 MZT2AQ6P582 158 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 ADGRD2Q7Z7M1 963 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 NRROSQ86YC3 692 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 YAF2Q8IY57 180 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 PSD4Q8NDX1 1056 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 TP53INP1Q96A56 240 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 NELL2Q99435 816 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 ACTRT3Q9BYD9 372 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 KIR3DX1Q9H7L2 352 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 MTHFD2LQ9H903 347 aaPredicted RBP12.27□□□□□ -0.44
CPSF7-223ENST00000544669 SFXN1Q9H9B4 322 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 ANKRA2Q9H9E1 313 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 PRDM7Q9NQW5 492 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 OR6C2Q9NZP2 312 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 H2AFY2Q9P0M6 372 aaPredicted RBP12.27□□□□□ -0.44
CPSF7-223ENST00000544669 PHF11Q9UIL8 331 aa12.27□□□□□ -0.44
CPSF7-223ENST00000544669 KDM4EB2RXH2 506 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 CTDSP2O14595 271 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 AKAP8O43823 692 aaKnown RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 LCMT2O60294 686 aaKnown RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 SEMA7AO75326 666 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 ERAL1O75616 437 aaKnown RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 CCNKO75909 580 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 KCNK2O95069 426 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 OR5F1O95221 314 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 HLA-DPB1P04440 258 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 TP53P04637 393 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 APODP05090 189 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 HOXC4P09017 264 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 FPR3P25089 353 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 OR2B6P58173 313 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 RPS15AP62244 130 aaKnown RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 PPP3R1P63098 170 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 GPR50Q13585 617 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 RUNX3Q13761 415 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 KCNJ8Q15842 424 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 BCL2A1Q16548 175 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 ZNF730Q6ZMV8 503 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 MTSS1LQ765P7 747 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 C16orf62Q7Z3J2 963 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 NLGN4XQ8N0W4 816 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 LINC01555Q8NAE3 123 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 FAM83FQ8NEG4 500 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 IL17RDQ8NFM7 739 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 OR6T1Q8NGN1 323 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 ACOT11Q8WXI4 607 aaPredicted RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 JAM3Q9BX67 310 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 OR2B2Q9GZK3 357 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 ABCG4Q9H172 646 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 OSGEPL1Q9H4B0 414 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 SERHL2Q9H4I8 314 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 SNTG1Q9NSN8 517 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 IMP3Q9NV31 184 aaKnown RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 TXNL4BQ9NX01 149 aaKnown RBP12.27□□□□□ -0.45
CPSF7-223ENST00000544669 ZNF221Q9UK13 617 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 SLC17A4Q9Y2C5 497 aa12.27□□□□□ -0.45
CPSF7-223ENST00000544669 DOCK6Q96HP0 2047 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 TRDV1A0A1B0GX56 115 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 M0R129 80 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 SEC14L5O43304 696 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 PRKYO43930 277 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 KAT7O95251 611 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 HBQ1P09105 142 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 IFI6P09912 130 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 CKMT1AP12532 417 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 ACP5P13686 325 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 TLX1P31314 330 aaPredicted RBP12.26□□□□□ -0.45
CPSF7-223ENST00000544669 SOX3P41225 446 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 CASP3P42574 277 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 PRKAG1P54619 331 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 BDH1Q02338 343 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 ENPP2Q13822 863 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 LASP1Q14847 261 aaKnown RBP12.26□□□□□ -0.45
CPSF7-223ENST00000544669 AGBL4Q5VU57 503 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 RPL13AP3Q6NVV1 102 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 LMNTD1Q8N9Z9 388 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 ANKK1Q8NFD2 765 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 NUP43Q8NFH3 380 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 OR2L3Q8NG85 312 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 OR4D11Q8NGI4 311 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 ADAMTS15Q8TE58 950 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 ASB12Q8WXK4 309 aa12.26□□□□□ -0.45
CPSF7-223ENST00000544669 HERVK_113Q902F9 699 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms