RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 STT3BQ8TCJ2 826 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 PTPMT1Q8WUK0 201 aaPredicted RBP12.37□□□□□ -0.43
CHFR-221ENST00000542714 XAGE5Q8WWM1 108 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 LRTOMTQ8WZ04 291 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 HOXB13Q92826 284 aaPredicted RBP12.37□□□□□ -0.43
CHFR-221ENST00000542714 SLC47A1Q96FL8 570 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 SEPHS2Q99611 448 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 CMKLR1Q99788 373 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 PELOQ9BRX2 385 aaKnown RBP12.37□□□□□ -0.43
CHFR-221ENST00000542714 STRADBQ9C0K7 418 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 RUBCNLQ9H714 662 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 THUMPD1Q9NXG2 353 aaKnown RBP12.37□□□□□ -0.43
CHFR-221ENST00000542714 P2RX2Q9UBL9 471 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 AURKCQ9UQB9 309 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 MUC6Q6W4X9 2439 aa12.37□□□□□ -0.43
CHFR-221ENST00000542714 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.36□□□□□ -0.43
CHFR-221ENST00000542714 TMX2-CTNND1H3BSU7 103 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 MEN1O00255 615 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 SLC28A2O43868 658 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 MT-ND1P03886 318 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 OPN1SWP03999 348 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 IFNA16P05015 189 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 ZGLP1P0C6A0 271 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 PTDSS1P48651 473 aaKnown RBP12.36□□□□□ -0.43
CHFR-221ENST00000542714 ANXA11P50995 505 aaKnown RBP12.36□□□□□ -0.43
CHFR-221ENST00000542714 CLCN2P51788 898 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 LIMK1P53667 647 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 MAPK10P53779 464 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 FUT7Q11130 342 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 BIKQ13323 160 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 ZNF267Q14586 743 aaPredicted RBP12.36□□□□□ -0.43
CHFR-221ENST00000542714 DUSP5Q16690 384 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 CRB2Q5IJ48 1285 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 INTS11Q5TA45 600 aaKnown RBP12.36□□□□□ -0.43
CHFR-221ENST00000542714 HES3Q5TGS1 186 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 FAM198BQ6UWH4 519 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 LRRC74BQ6ZQY2 392 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 RAB11FIP2Q7L804 512 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 ASCL5Q7RTU5 278 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 ERMP1Q7Z2K6 904 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 SLC44A2Q8IWA5 706 aaPredicted RBP12.36□□□□□ -0.43
CHFR-221ENST00000542714 METTL25Q8N6Q8 603 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 CDS1Q92903 461 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 RBM18Q96H35 190 aaKnown RBP12.36□□□□□ -0.43
CHFR-221ENST00000542714 PYURFQ96I23 114 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 LRFN5Q96NI6 719 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 SLC26A1Q9H2B4 701 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 MAGIXQ9H6Y5 334 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 FOLH1BQ9HBA9 442 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 PNO1Q9NRX1 252 aaKnown RBP12.36□□□□□ -0.43
CHFR-221ENST00000542714 C14orf105Q9NVL8 296 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 GIN1Q9NXP7 522 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 C6orf203Q9P0P8 240 aaPredicted RBP12.36□□□□□ -0.43
CHFR-221ENST00000542714 ERVK-19Q9WJR5 959 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 DTX4Q9Y2E6 619 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 B3GALT1Q9Y5Z6 326 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 PTPRBP23467 1997 aa12.36□□□□□ -0.43
CHFR-221ENST00000542714 CCDC187A0A096LP49 1063 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 TEX51A0A1B0GUA7 166 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 A8MUA0 341 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 C17orf105B2RV13 164 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 C5orf58C9J3I9 102 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 M0QX08 132 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 CASQ2O14958 399 aaPredicted RBP12.35□□□□□ -0.43
CHFR-221ENST00000542714 TPST1O60507 370 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 COQ9O75208 318 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 PGM3O95394 542 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 ZIC2O95409 532 aaPredicted RBP12.35□□□□□ -0.43
CHFR-221ENST00000542714 ZNF682O95780 498 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 DDAH2O95865 285 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 CAPNS1P04632 268 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 RAP2AP10114 183 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 CD247P20963 164 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 EMDP50402 254 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 ZNF155Q12901 538 aaPredicted RBP12.35□□□□□ -0.43
CHFR-221ENST00000542714 ELOAQ14241 798 aaKnown RBP12.35□□□□□ -0.43
CHFR-221ENST00000542714 FAM98BQ52LJ0 330 aaKnown RBP12.35□□□□□ -0.43
CHFR-221ENST00000542714 MRPL14Q6P1L8 145 aaKnown RBP12.35□□□□□ -0.43
CHFR-221ENST00000542714 LANCL3Q6ZV70 420 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 VTCN1Q7Z7D3 282 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 AMIGO2Q86SJ2 522 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 ZNF321PQ8N8H1 164 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 ZNF615Q8N8J6 731 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 FKBP10Q96AY3 582 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 HSH2DQ96JZ2 352 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 RNF145Q96MT1 663 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 VSTM2LQ96N03 204 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 DEPDC7Q96QD5 511 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 SPSB2Q99619 263 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 MESP1Q9BRJ9 268 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 LMF2Q9BU23 707 aaKnown RBP12.35□□□□□ -0.43
CHFR-221ENST00000542714 EFHD1Q9BUP0 239 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 CNPPD1Q9BV87 410 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 CHID1Q9BWS9 393 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 UGT2B28Q9BY64 529 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 ULBP3Q9BZM4 244 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 PIGUQ9H490 435 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 SOX17Q9H6I2 414 aaPredicted RBP12.35□□□□□ -0.43
CHFR-221ENST00000542714 BCL2L10Q9HD36 194 aa12.35□□□□□ -0.43
CHFR-221ENST00000542714 AGPAT4Q9NRZ5 378 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms