RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 OSBPL11Q9BXB4 747 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 METTL7AQ9H8H3 244 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 CALHM2Q9HA72 323 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 WDR41Q9HAD4 459 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 CLCF1Q9UBD9 225 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 PLLPQ9Y342 182 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 FBN3Q75N90 2809 aa14.06□□□□□ -0.16
CLSTN3-213ENST00000541953 FAM187AA6NFU0 413 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 CAPN14A8MX76 684 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 UGDHO60701 494 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 SEMA3DO95025 777 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 IL18BPO95998 194 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 GSTA2P09210 222 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 TCEA1P23193 301 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 OPRM1P35372 400 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 FEN1P39748 380 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 PAFAH1B1P43034 410 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 TMED10P49755 219 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 NRG3P56975 720 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 MRPS35P82673 323 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 BIVMQ86UB2 503 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 KIF18BQ86Y91 864 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 C17orf47Q8NEP4 570 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 SPATA4Q8NEY3 305 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 ZPLD1Q8TCW7 415 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 INTS12Q96CB8 462 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 ARSGQ96EG1 525 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 LRRC46Q96FV0 321 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 C18orf12Q96KH6 178 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 YIPF4Q9BSR8 244 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 BRINP2Q9C0B6 783 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 OR2B2Q9GZK3 357 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 ZNF639Q9UID6 485 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 FBXL2Q9UKC9 423 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 JMJD1CQ15652 2540 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 TLN2Q9Y4G6 2542 aa14.05□□□□□ -0.16
CLSTN3-213ENST00000541953 CUBNO60494 3623 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 A0A087X1B8 175 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 A0A096LPK6 155 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 SYCE1LA8MT33 242 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 H0Y3Z8 333 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 KLHL2O95198 593 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 CLDN9O95484 217 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 TGM6O95932 706 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 INHBBP09529 407 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 CYP4B1P13584 511 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 PORP16435 677 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 LHX2P50458 406 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 GFRA1P56159 465 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 PHEXP78562 749 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 GALNT1Q10472 559 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 ACAP2Q15057 778 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 TRMT12Q53H54 448 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 SGO1Q5FBB7 561 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 SLC48A1Q6P1K1 146 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 TRIM42Q8IWZ5 723 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 OR7G1Q8NGA0 311 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 CTHRC1Q96CG8 243 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 REPS1Q96D71 796 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 PHF21BQ96EK2 531 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 HBEGFQ99075 208 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 SERPINI1Q99574 410 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 PSD3Q9NYI0 1048 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 KLRF1Q9NZS2 232 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 C6orf203Q9P0P8 240 aaPredicted RBP14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 FETUBQ9UGM5 382 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 BCAP29Q9UHQ4 241 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 PCTPQ9UKL6 214 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 PCDHA9Q9Y5H5 950 aa14.04□□□□□ -0.16
CLSTN3-213ENST00000541953 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 ESYT3A0FGR9 886 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 SH3D21A4FU49 640 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 PRAMEF25A6NGN4 478 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 TNFSF13O75888 250 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 ACTL6AO96019 429 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 CPN1P15169 458 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 PCSK2P16519 638 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 TSPAN8P19075 237 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 CCKARP32238 428 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 STX2P32856 288 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 EMDP50402 254 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 CLDN18P56856 261 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 NKX6-1P78426 367 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 PLCXD2Q0VAA5 305 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 RCAN2Q14206 197 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 FAM83EQ2M2I3 478 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 TCHHL1Q5QJ38 904 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 FRG2Q64ET8 278 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 TMEM81Q6P7N7 255 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 COMMD6Q7Z4G1 85 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 PRIMA1Q86XR5 153 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 METTL4Q8N3J2 472 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 OR52R1Q8NGF1 315 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 CNRIP1Q96F85 164 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 LCORQ96JN0 433 aaPredicted RBP14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 FRG2BQ96QU4 278 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 PIGQQ9BRB3 760 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 HEY2Q9UBP5 337 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 ZNF225Q9UK10 706 aa14.03□□□□□ -0.16
CLSTN3-213ENST00000541953 TESMINQ9Y4I5 508 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms