RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 DPYSL5Q9BPU6 564 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 SORBS1Q9BX66 1292 aaKnown RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 SMOC1Q9H4F8 434 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 IKZF5Q9H5V7 419 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 ARNT2Q9HBZ2 717 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 MED11Q9P086 117 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 DIMT1Q9UNQ2 313 aaKnown RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 GLYATL1P3A0A0U1RQE8 302 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 IQCMA0A1B0GVH7 501 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 SH3BGRLO75368 114 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 ALPPL2P10696 532 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 MTHFD2P13995 350 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 ZNF7P17097 686 aaPredicted RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 SOAT1P35610 550 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 DSG2Q14126 1118 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 IRF3Q14653 427 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 FAM198BQ6UWH4 519 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 TOMM5Q8N4H5 51 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 TEX47Q8TBZ9 253 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 KIAA1143Q96AT1 154 aaPredicted RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 ZFP3Q96NJ6 502 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 GINS4Q9BRT9 223 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 POPDC3Q9HBV1 291 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 H2AFY2Q9P0M6 372 aaPredicted RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 PCDHGA5Q9Y5G8 931 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 TEX46H3BTG2 121 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 PCDH17O14917 1159 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 SGCEO43556 437 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 HPGDSO60760 199 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 PPM1BO75688 479 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 LDOC1O95751 146 aaPredicted RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 CER1O95813 267 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 TGM6O95932 706 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 SCG5P05408 212 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 ACSM4P0C7M7 580 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 RRASP10301 218 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 PRPS2P11908 318 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 GANABQ14697 944 aaKnown RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 GRM7Q14831 915 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 MS4A13Q5J8X5 152 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 GOLGA7Q7Z5G4 137 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 PDZD3Q86UT5 571 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 MARCH9Q86YJ5 346 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 CCDC36Q8IYA8 594 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 SPAG16Q8N0X2 631 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 AQP11Q8NBQ7 271 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 MARC2Q969Z3 335 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 TOE1Q96GM8 510 aaKnown RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 SDHCQ99643 169 aaPredicted RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 GABARAPL1Q9H0R8 117 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 EMC7Q9NPA0 242 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 CUEDC1Q9NWM3 386 aaPredicted RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 CNOT2Q9NZN8 540 aaKnown RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 V9GYH0 126 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 CACNA1EQ15878 2313 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 A0A0C4DFX4 3053 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 MGAT4DA6NG13 374 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 STC2O76061 302 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 CTPS1P17812 591 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 ZP3P21754 424 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 MAT2AP31153 395 aaKnown RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 CDKN1CP49918 316 aaPredicted RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 CRISP3P54108 245 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 CLDN20P56880 219 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 YBEYP58557 167 aaPredicted RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 GMFBP60983 142 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 ZNF79Q15937 498 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 PTCHD3Q3KNS1 767 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 STPG1Q5TH74 334 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 PDZD9Q8IXQ8 264 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 UMODL1-AS1Q8N2C9 162 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 OR4M1Q8NGD0 313 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 ELMOD3Q96FG2 381 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 LOXL4Q96JB6 756 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 COPS8Q99627 209 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 DPH2Q9BQC3 489 aaPredicted RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 IL20Q9NYY1 176 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 TVP23BQ9NYZ1 205 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 AKAP7Q9P0M2 348 aaPredicted RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 ELF5Q9UKW6 265 aaPredicted RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 TDRD15B5MCY1 1934 aaKnown RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 LOC285095A0A1B0GVY8 99 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 EEF1E1O43324 174 aaKnown RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 LALBAP00709 142 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 CTSEP14091 401 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 JUPP14923 745 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 PVALBP20472 110 aaPredicted RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 ACSL1P33121 698 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 CHI3L1P36222 383 aaPredicted RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 OR1E2P47887 323 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 SMSP52788 366 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 CAV3P56539 151 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 ERVK-25P63136 954 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 S100A12P80511 92 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 C18orf21Q32NC0 220 aaPredicted RBP8.23□□□□□ -1.09
DDB1-217ENST00000540166 XKR7Q5GH72 579 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 PSAPL1Q6NUJ1 521 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 KANSL1Q7Z3B3 1105 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 LIX1LQ8IVB5 337 aa8.23□□□□□ -1.09
DDB1-217ENST00000540166 CLDN22Q8N7P3 220 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms