RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ANGPTL8Q6UXH0 198 aa17.61■□□□□ 0.41
TNFRSF1A-213ENST00000540022 C10orf111Q8N326 155 aa17.61■□□□□ 0.41
TNFRSF1A-213ENST00000540022 OR11G2Q8NGC1 345 aa17.61■□□□□ 0.41
TNFRSF1A-213ENST00000540022 KCNE4Q8WWG9 221 aa17.61■□□□□ 0.41
TNFRSF1A-213ENST00000540022 TMEM125Q96AQ2 219 aa17.61■□□□□ 0.41
TNFRSF1A-213ENST00000540022 THUMPD3Q9BV44 507 aaKnown RBP17.61■□□□□ 0.41
TNFRSF1A-213ENST00000540022 LRMDAQ9H2I8 198 aa17.61■□□□□ 0.41
TNFRSF1A-213ENST00000540022 BCAP29Q9UHQ4 241 aa17.61■□□□□ 0.41
TNFRSF1A-213ENST00000540022 IGHV1-45A0A0A0MS14 117 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 C15orf38-AP3S2A0A0A6YYH1 394 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 A0A1W2PQ72 361 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 CREG1O75629 220 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 KRT75O95678 551 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 HMGN2P05204 90 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 COX6A1P12074 109 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 RPS26P62854 115 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 TLE3Q04726 772 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 LASP1Q14847 261 aaKnown RBP17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 COX20Q5RI15 118 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 BHLHB9Q6PI77 547 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 ARPINQ7Z6K5 226 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 RNF130Q86XS8 419 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 KIF2BQ8N4N8 673 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 ZNF615Q8N8J6 731 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 MORN4Q8NDC4 146 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 OR52N2Q8NGI0 321 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 NACC2Q96BF6 587 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 ART5Q96L15 291 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 NUDT9Q9BW91 350 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 ZNF700Q9H0M5 742 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 SERHL2Q9H4I8 314 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 EQTNQ9NQ60 294 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 TMEM181Q9P2C4 612 aa17.6■□□□□ 0.41
TNFRSF1A-213ENST00000540022 EVPLLA8MZ36 301 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 NME4O00746 187 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 KLK10O43240 276 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 GPX2P18283 190 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 PPIBP23284 216 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 EMDP50402 254 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 SLC37A1P57057 533 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 SLC26A5P58743 744 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 RGNQ15493 299 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 DNAL1Q4LDG9 190 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.59■□□□□ 0.414e-6■■■□□ 16.5
TNFRSF1A-213ENST00000540022 ASRGL1Q7L266 308 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 B3GNT7Q8NFL0 401 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 OR7G1Q8NGA0 311 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 OR1N1Q8NGS0 311 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 ADAMTS17Q8TE56 1095 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 NCLNQ969V3 563 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 C16orf58Q96GQ5 468 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 SLC35G5Q96KT7 338 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 MS4A4EQ96PG1 132 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 CDRT15Q96T59 188 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 SH3GL1Q99961 368 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 YIPF4Q9BSR8 244 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 OR10A5Q9H207 317 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 KAT8Q9H7Z6 458 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 SPAG4Q9NPE6 437 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 ABCD2Q9UBJ2 740 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 PACSIN3Q9UKS6 424 aa17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 PPIEQ9UNP9 301 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1A-213ENST00000540022 GSC2O15499 205 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 EFSO43281 561 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 COQ9O75208 318 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 BCAS2O75934 225 aaPredicted RBP17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 VAC14Q08AM6 782 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 MFSD12Q6NUT3 480 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 BNC2Q6ZN30 1099 aaPredicted RBP17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 WDR53Q7Z5U6 358 aaPredicted RBP17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 MRGPREQ86SM8 312 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 APCDD1LQ8NCL9 501 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 C16orf52Q8NHV5 167 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 IMMP1LQ96LU5 166 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 EFHD1Q9BUP0 239 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 CADM1Q9BY67 442 aaKnown RBP17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 ADA2Q9NZK5 511 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 GMPR2Q9P2T1 348 aaKnown RBP17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 DTX4Q9Y2E6 619 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 L3MBTL1Q9Y468 752 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 CROCCQ5TZA2 2017 aa17.58■□□□□ 0.41
TNFRSF1A-213ENST00000540022 ATMQ13315 3056 aa17.58■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PRAMEF2O60811 474 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ETFAP13804 333 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 MATN1P21941 496 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 CRATP43155 626 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 RNF111Q6ZNA4 994 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 RAB43Q86YS6 212 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 HORMAD2Q8N7B1 307 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 RNF148Q8N7C7 305 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 OR10A6Q8NH74 314 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 FBXO30Q8TB52 745 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 OTUB1Q96FW1 271 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 THTPAQ9BU02 230 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 SEMA4CQ9C0C4 833 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 PRORYQ9H606 182 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 FOLH1BQ9HBA9 442 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 P4HTMQ9NXG6 502 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 COPS7AQ9UBW8 275 aa17.57■□□□□ 0.4
TNFRSF1A-213ENST00000540022 ZNF223Q9UK11 482 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms