RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PRICKLE4Q2TBC4 344 aa21■□□□□ 0.95
HOMER3-204ENST00000539827 FAM214AQ32MH5 1076 aa21■□□□□ 0.95
HOMER3-204ENST00000539827 DGAT2L6Q6ZPD8 337 aa21■□□□□ 0.95
HOMER3-204ENST00000539827 SATL1Q86VE3 508 aa21■□□□□ 0.95
HOMER3-204ENST00000539827 SLC5A8Q8N695 610 aa21■□□□□ 0.95
HOMER3-204ENST00000539827 ING2Q9H160 280 aa21■□□□□ 0.95
HOMER3-204ENST00000539827 SLC38A1Q9H2H9 487 aa21■□□□□ 0.95
HOMER3-204ENST00000539827 MAT2BQ9NZL9 334 aa21■□□□□ 0.95
HOMER3-204ENST00000539827 NINQ8N4C6 2090 aa21■□□□□ 0.95
HOMER3-204ENST00000539827 TNRC6BQ9UPQ9 1833 aaKnown RBP20.99■□□□□ 0.95
HOMER3-204ENST00000539827 M0R3H8 397 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 FFAR1O14842 300 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 BCKDKO14874 412 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 SLC16A6O15403 523 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 HRO43593 1189 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 CDC123O75794 336 aaPredicted RBP20.99■□□□□ 0.95
HOMER3-204ENST00000539827 NSA2O95478 260 aaKnown RBP20.99■□□□□ 0.95
HOMER3-204ENST00000539827 CD1CP29017 333 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 EPHA8P29322 1005 aaPredicted RBP20.99■□□□□ 0.95
HOMER3-204ENST00000539827 ARL4DP49703 201 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 CLK3P49761 638 aaKnown RBP20.99■□□□□ 0.95
HOMER3-204ENST00000539827 PDX1P52945 283 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 FAM53BQ14153 422 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 MICAQ29983 383 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 KCTD21Q4G0X4 260 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 LIN52Q52LA3 116 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 TCTE1Q5JU00 501 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 FEVQ99581 238 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 SPATA5L1Q9BVQ7 753 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 RLIMQ9NVW2 624 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 LIPT1Q9Y234 373 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 PCDHGA8Q9Y5G5 932 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 EPPINO95925 133 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 RPL5P46777 297 aaKnown RBP20.99■□□□□ 0.95
HOMER3-204ENST00000539827 SKP1P63208 163 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 SLC13A2Q13183 592 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 DUSP5Q16690 384 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 GARNL3Q5VVW2 1013 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 PRAMEF8Q5VWM4 474 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 PRAMEF7Q5VXH5 474 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 PLXDC1Q8IUK5 500 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 OR6C4Q8NGE1 309 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 EDAQ92838 391 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 CCDC74AQ96AQ1 378 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 ZG16BQ96DA0 208 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 TRNT1Q96Q11 434 aaKnown RBP20.99■□□□□ 0.95
HOMER3-204ENST00000539827 BTBD2Q9BX70 525 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 CHRNA10Q9GZZ6 450 aa20.99■□□□□ 0.95
HOMER3-204ENST00000539827 TMEM184BQ9Y519 407 aaPredicted RBP20.99■□□□□ 0.95
HOMER3-204ENST00000539827 USP34Q70CQ2 3546 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 DUXAA6NLW8 204 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 TGFBR3LH3BV60 316 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 PCDHGA12O60330 932 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 OR10H2O60403 315 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 UGT2B11O75310 529 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 SEMA7AO75326 666 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 ZIC2O95409 532 aaPredicted RBP20.98■□□□□ 0.95
HOMER3-204ENST00000539827 PAX7P23759 505 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 GPR3P46089 330 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 AVPR1BP47901 424 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 LIMS1P48059 325 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 MEP1AQ16819 746 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 ZNF691Q5VV52 312 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 TCTN3Q6NUS6 607 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 C1orf210Q8IVY1 113 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 OR9Q2Q8NGE9 314 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 SUSD2Q9UGT4 822 aa20.98■□□□□ 0.95
HOMER3-204ENST00000539827 A0A087WV62 115 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 A0A1B0GTQ1 180 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 OR2W5A6NFC9 320 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 A8MVJ9 347 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 TMEM150CB9EJG8 249 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 PLOD3O60568 738 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 FCMRO60667 390 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 ALPPP05187 535 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 SLC35E2P0CK97 266 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 IL7RP16871 459 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 CDH2P19022 906 aaPredicted RBP20.97■□□□□ 0.95
HOMER3-204ENST00000539827 HEPHL1Q6MZM0 1159 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 KANSL1Q7Z3B3 1105 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 VRK2Q86Y07 508 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 ZNF675Q8TD23 568 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 EPB41L1Q9H4G0 881 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 PRTFDC1Q9NRG1 225 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 NLGN3Q9NZ94 848 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 CALML5Q9NZT1 146 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 FITM1A5D6W6 292 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 CCNB2O95067 398 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 EPHA2P29317 976 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 HMGA2P52926 109 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 BTG2P78543 158 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 GPLD1P80108 840 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 HSD11B2P80365 405 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 CD47Q08722 323 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 RAPSNQ13702 412 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 GRM7Q14831 915 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 CTU2Q2VPK5 515 aaKnown RBP20.97■□□□□ 0.95
HOMER3-204ENST00000539827 HLA-BQ31612 363 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 INAVAQ3KP66 663 aa20.97■□□□□ 0.95
HOMER3-204ENST00000539827 ZNF311Q5JNZ3 666 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms