RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 BLKP51451 505 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 HMGA2P52926 109 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 SEC23BQ15437 767 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 CEBPEQ15744 281 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 CTF1Q16619 201 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 LEXMQ3ZCV2 418 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 OOSP2Q86WS3 158 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 TMEM52Q8NDY8 209 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 OR4K14Q8NGD5 310 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 SFXN5Q8TD22 340 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 HSPBAP1Q96EW2 488 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 PRR14Q9BWN1 585 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 GPN2Q9H9Y4 310 aaPredicted RBP16.39■□□□□ 0.21
SNX17-210ENST00000537606 C3orf14Q9HBI5 128 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 ATXN8OSP0DMR3 200 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 PPM1FP49593 454 aaPredicted RBP16.39■□□□□ 0.21
SNX17-210ENST00000537606 COLEC12Q5KU26 742 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 LSRQ86X29 649 aaPredicted RBP16.39■□□□□ 0.21
SNX17-210ENST00000537606 KRT73Q86Y46 540 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 P3H2Q8IVL5 708 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 LRRC25Q8N386 305 aaPredicted RBP16.39■□□□□ 0.21
SNX17-210ENST00000537606 CSNK1A1LQ8N752 337 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 LMX1AQ8TE12 382 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 HLA-CQ95604 372 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 ZNF556Q9HAH1 456 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 FBXL21Q9UKT6 434 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 PCDHGB1Q9Y5G3 927 aa16.39■□□□□ 0.21
SNX17-210ENST00000537606 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 OCA2Q04671 838 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 CHRNEQ04844 493 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 ARMC6Q6NXE6 501 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 SLC16A11Q8NCK7 471 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 GIMAP5Q96F15 307 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 CCDC3Q9BQI4 270 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 ACOT13Q9NPJ3 140 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 ZNF226Q9NYT6 803 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 PHF11Q9UIL8 331 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 KCND3Q9UK17 655 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 POFUT2Q9Y2G5 429 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 SLC22A7Q9Y694 548 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 SGK494L7N484 410 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 STK25O00506 426 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 POU1F1P28069 291 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 TLX1P31314 330 aaPredicted RBP16.38■□□□□ 0.21
SNX17-210ENST00000537606 SHC2P98077 582 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 SRSF5Q13243 272 aaKnown RBP16.38■□□□□ 0.21
SNX17-210ENST00000537606 ARHGAP22Q7Z5H3 698 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 AVL9Q8NBF6 648 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 SLC9A6Q92581 669 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 ROGDIQ9GZN7 287 aa16.38■□□□□ 0.21
SNX17-210ENST00000537606 FRS3O43559 492 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 FCMRO60667 390 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 SDC3O75056 442 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 IGFBP1P08833 259 aaPredicted RBP16.37■□□□□ 0.21
SNX17-210ENST00000537606 CDH3P22223 829 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 ACVR2AP27037 513 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 CD38P28907 300 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 LSM11P83369 360 aaKnown RBP eCLIP16.37■□□□□ 0.21
SNX17-210ENST00000537606 TRMT12Q53H54 448 aaKnown RBP16.37■□□□□ 0.21
SNX17-210ENST00000537606 KLHL35Q6PF15 583 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 KLHL17Q6TDP4 642 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 RNF44Q7L0R7 432 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 ANKRD13BQ86YJ7 626 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 SIX5Q8N196 739 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 OR6T1Q8NGN1 323 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 SLC35A4Q96G79 324 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 DOLKQ9UPQ8 538 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 FAM221BA6H8Z2 402 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 SLC9B1P1A6NJY1 282 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 METTL12A8MUP2 240 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 ZSCAN9O15535 394 aaPredicted RBP16.37■□□□□ 0.21
SNX17-210ENST00000537606 CBLP22681 906 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 TGFBR1P36897 503 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 MAN2A2P49641 1150 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 RPL6Q02878 288 aaKnown RBP16.37■□□□□ 0.21
SNX17-210ENST00000537606 Q7L0L9 218 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 VRK2Q86Y07 508 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 RHOXF1Q8NHV9 184 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 BBS10Q8TAM1 723 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 RASSF5Q8WWW0 418 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 MOAP1Q96BY2 351 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 DTNBP1Q96EV8 351 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 COPS4Q9BT78 406 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 DNAAF2Q9NVR5 837 aaKnown RBP16.37■□□□□ 0.21
SNX17-210ENST00000537606 COLQQ9Y215 455 aaPredicted RBP16.37■□□□□ 0.21
SNX17-210ENST00000537606 SPAG17Q6Q759 2223 aa16.37■□□□□ 0.21
SNX17-210ENST00000537606 J3QRK9 145 aa16.36■□□□□ 0.21
SNX17-210ENST00000537606 FGF17O60258 216 aa16.36■□□□□ 0.21
SNX17-210ENST00000537606 OR10H3O60404 316 aa16.36■□□□□ 0.21
SNX17-210ENST00000537606 H1F0P07305 194 aaKnown RBP16.36■□□□□ 0.21
SNX17-210ENST00000537606 ELAVL4P26378 380 aaKnown RBP16.36■□□□□ 0.21
SNX17-210ENST00000537606 CD27P26842 260 aa16.36■□□□□ 0.21
SNX17-210ENST00000537606 SOX18P35713 384 aa16.36■□□□□ 0.21
SNX17-210ENST00000537606 ANXA11P50995 505 aaKnown RBP16.36■□□□□ 0.21
SNX17-210ENST00000537606 VBP1P61758 197 aa16.36■□□□□ 0.21
SNX17-210ENST00000537606 DCST1Q5T197 706 aa16.36■□□□□ 0.21
SNX17-210ENST00000537606 ZNF770Q6IQ21 691 aaPredicted RBP16.36■□□□□ 0.21
SNX17-210ENST00000537606 PRSS48Q7RTY5 328 aa16.36■□□□□ 0.21
SNX17-210ENST00000537606 ARL14Q8N4G2 192 aa16.36■□□□□ 0.21
SNX17-210ENST00000537606 NDNFQ8TB73 568 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms