RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 SLC1A2P43004 574 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 SERPINB4P48594 390 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 TMED10P49755 219 aaKnown RBP7.4□□□□□ -1.22
CLIP1-206ENST00000535290 C21orf58P58505 322 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 RPS13P62277 151 aaKnown RBP7.4□□□□□ -1.22
CLIP1-206ENST00000535290 BSPH1Q075Z2 132 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 DOC2AQ14183 400 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 GGTLC2Q14390 218 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 PON3Q15166 354 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 KCTD19Q17RG1 926 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-206ENST00000535290 SPRED3Q2MJR0 410 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 HLA-DQA1Q5Y7H0 255 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 ST13P4Q8IZP2 240 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF619Q8N2I2 560 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 TTLQ8NG68 377 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 ZFAND2BQ8WV99 257 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 RIT1Q92963 219 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 HGDQ93099 445 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 S100PBPQ96BU1 408 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 OSBPL11Q9BXB4 747 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 RPF2Q9H7B2 306 aaKnown RBP7.4□□□□□ -1.22
CLIP1-206ENST00000535290 ZNF696Q9H7X3 374 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 ABHD10Q9NUJ1 306 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 IFNKQ9P0W0 207 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 WHRNQ9P202 907 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 ARMCX1Q9P291 453 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 CLEC4AQ9UMR7 237 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 GPR52Q9Y2T5 361 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 COMMD10Q9Y6G5 202 aa7.4□□□□□ -1.22
CLIP1-206ENST00000535290 TCRBV7S3A2A0A539 114 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 ANKDD1BA6NHY2 528 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 SHISA9B4DS77 424 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 LIASO43766 372 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 PRAMEF4O60810 478 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 SH3BGRLO75368 114 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 TNFRSF21O75509 655 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 PPM1BO75688 479 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 LY6HO94772 140 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 RHOXF2BP0C7M4 288 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 PSMB1P20618 241 aaKnown RBP7.39□□□□□ -1.23
CLIP1-206ENST00000535290 GSTM2P28161 218 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 SRP14P37108 136 aaKnown RBP7.39□□□□□ -1.23
CLIP1-206ENST00000535290 GDF5P43026 501 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 SLC6A8P48029 635 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 KCNC1P48547 511 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 CDKN2DP55273 166 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 NRG3P56975 720 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 THOC5Q13769 683 aaKnown RBP7.39□□□□□ -1.23
CLIP1-206ENST00000535290 DHX34Q14147 1143 aaKnown RBP7.39□□□□□ -1.23
CLIP1-206ENST00000535290 RAB35Q15286 201 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 TSC22D1Q15714 1073 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 TAB1Q15750 504 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 NNATQ16517 81 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 C18orf21Q32NC0 220 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-206ENST00000535290 PRAMEF9Q5VWM5 478 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 C18orf63Q68DL7 685 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 OR5M10Q6IEU7 315 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 C11orf71Q6IPW1 123 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 TMEM81Q6P7N7 255 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 SEZ6L2Q6UXD5 910 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 LUZP1Q86V48 1076 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 PLCZ1Q86YW0 608 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 C3orf49Q96BT1 292 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 KCNC2Q96PR1 638 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 SOX7Q9BT81 388 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 SORBS1Q9BX66 1292 aaKnown RBP7.39□□□□□ -1.23
CLIP1-206ENST00000535290 TRIM54Q9BYV2 358 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 NXF5Q9H1B4 397 aaKnown RBP7.39□□□□□ -1.23
CLIP1-206ENST00000535290 OR10A4Q9H209 315 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 EHD3Q9NZN3 535 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 KLRF1Q9NZS2 232 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 PAK5Q9P286 719 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 FBXO5Q9UKT4 447 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 ZNF490Q9ULM2 529 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-206ENST00000535290 ZNF175Q9Y473 711 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 SPACA6W5XKT8 324 aa7.39□□□□□ -1.23
CLIP1-206ENST00000535290 IGHV4-61A0A0C4DH41 118 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 ZCWPW2A0A1B0GU75 182 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 A0A1W2PS29 197 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 PABPN1LA6NDY0 278 aaKnown RBP7.38□□□□□ -1.23
CLIP1-206ENST00000535290 PRAMEF25A6NGN4 478 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 C17orf51A8MQB3 221 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 VWC2LB2RUY7 222 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 FAM157AC9JC47 383 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 SEC14L5O43304 696 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 UGT2B11O75310 529 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 SCELO95171 688 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 GPR75O95800 540 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 FESP07332 822 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 PEPDP12955 493 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 APEHP13798 732 aaKnown RBP7.38□□□□□ -1.23
CLIP1-206ENST00000535290 KRT15P19012 456 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 GNAZP19086 355 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 HIST1H1TP22492 207 aaPredicted RBP7.38□□□□□ -1.23
CLIP1-206ENST00000535290 ADH6P28332 368 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 NEK2P51955 445 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 CLDN20P56880 219 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 BASP1P80723 227 aaKnown RBP7.38□□□□□ -1.23
CLIP1-206ENST00000535290 HMGCS1Q01581 520 aa7.38□□□□□ -1.23
CLIP1-206ENST00000535290 TGM3Q08188 693 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms