RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	TLE3	Q04726	772 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SHISA6	Q6ZSJ9	500 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TCTN2	Q96GX1	697 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PFDN2	Q9UHV9	154 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ACSL6	Q9UKU0	697 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC22A31	A6NKX4	558 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZBTB42	B2RXF5	422 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	GDF1	P27539	372 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DCDC1	P59894	354 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PUDP	Q08623	228 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CDK10	Q15131	360 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TRAM1	Q15629	374 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZFP69	Q49AA0	526 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RDH12	Q96NR8	316 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC5A7	Q9GZV3	580 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CWH43	Q9H720	699 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MARCH5	Q9NX47	278 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DISC1	C4P0D8	188 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	E2F3	O00716	465 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SFTPD	P35247	375 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	LAPTM4A	Q15012	233 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	EXOC3L2	Q2M3D2	409 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TTTY10	Q9BZA0	68 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	C2orf42	Q9NWW7	574 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF221	Q9UK13	617 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	NAALAD2	Q9Y3Q0	740 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF451	Q9Y4E5	1061 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MMP2	P08253	660 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	NAA10	P41227	235 aa	Predicted RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	VASP	P50552	380 aa	Predicted RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CTSC	P53634	463 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ALKAL1	Q6UXT8	129 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR8K3	Q8NH51	312 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SNIP1	Q8TAD8	396 aa	Known RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	UHRF1	Q96T88	793 aa	Predicted RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	STARD5	Q9NSY2	213 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	HS3ST2	Q9Y278	367 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TOPAZ1	Q8N9V7	1692 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZCWPW2	A0A1B0GU75	182 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SCRG1	O75711	98 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PRAMEF8	Q5VWM4	474 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PRAMEF7	Q5VXH5	474 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PKP2	Q99959	881 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	BOK	Q9UMX3	212 aa	Predicted RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RPH3A	Q9Y2J0	694 aa	Predicted RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	FOXE1	O00358	373 aa	Predicted RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR2T1	O43869	369 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PRLHR	P49683	370 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ERVPABLB-1	P60509	514 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CSNK2A1	P68400	391 aa	Predicted RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TUBA3C	Q13748	450 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	C18orf21	Q32NC0	220 aa	Predicted RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ACOT4	Q8N9L9	421 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CUTC	Q9NTM9	273 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TUBA8	Q9NY65	449 aa	Predicted RBP	14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CA5B	Q9Y2D0	317 aa		14.93	□□□□□ -0.02
NCAPD3-213	ENST00000534532	FAM189A1	O60320	539 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CACNG3	O60359	315 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PNMT	P11086	282 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	GCH1	P30793	250 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF829	Q3KNS6	432 aa	Predicted RBP	14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	GAREM2	Q75VX8	874 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MSLNL	Q96KJ4	702 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR5B2	Q96R09	309 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TOR3A	Q9H497	397 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DMRT3	Q9NQL9	472 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	THAP10	Q9P2Z0	257 aa	Predicted RBP	14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	LRRC42	Q9Y546	428 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ANTXRL	A6NF34	631 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SCGB2A1	O75556	95 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	LAMP1	P11279	417 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ACPP	P15309	386 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	POU3F2	P20265	443 aa	Predicted RBP	14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CTH	P32929	405 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RACK1	P63244	317 aa	Known RBP	14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	FAM189B	P81408	668 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	BLOC1S3	Q6QNY0	202 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RBM24	Q9BX46	236 aa	Known RBP	14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DCSTAMP	Q9H295	470 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ABCD2	Q9UBJ2	740 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SCN11A	Q9UI33	1791 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CCDC88A	Q3V6T2	1871 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PRL	P01236	227 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	EDN1	P05305	212 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CD3G	P09693	182 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	UBL4A	P11441	157 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	VAMP1	P23763	118 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SMAD4	Q13485	552 aa	Known RBP	14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RPE65	Q16518	533 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MYRFL	Q96LU7	910 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR10A4	Q9H209	315 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	KCMF1	Q9P0J7	381 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ERVK-19	Q9WJR5	959 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	E2F1	Q01094	437 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ROR2	Q01974	943 aa	Known RBP	14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	C3P1	Q6ZMU1	363 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR8J1	Q8NGP2	316 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ELSPBP1	Q96BH3	223 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SH3BGRL2	Q9UJC5	107 aa		14.92	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SCP2D1	Q9UJQ7	156 aa		14.92	□□□□□ -0.02

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms