RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 KERAO60938 352 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 SMNDC1O75940 238 aaKnown RBP eCLIP13.55□□□□□ -0.24
CTSB-230ENST00000534149 FPR1P21462 350 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 NT5EP21589 574 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 PHEXP78562 749 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 DR1Q01658 176 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 GAB1Q13480 694 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 C6orf163Q5TEZ5 329 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 SLC30A6Q6NXT4 461 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 TMEM81Q6P7N7 255 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 ISCA2Q86U28 154 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 IFNEQ86WN2 208 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 NUDT13Q86X67 352 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 PPP1R14CQ8TAE6 165 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 CTHRC1Q96CG8 243 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 OMA1Q96E52 524 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 FAM111AQ96PZ2 611 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 CPNE1Q99829 537 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 PIGQQ9BRB3 760 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 ITPAQ9BY32 194 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
CTSB-230ENST00000534149 TSC22D4Q9Y3Q8 395 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 ANGPTL3Q9Y5C1 460 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 PCDHGA11Q9Y5H2 935 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 USF3Q68DE3 2245 aa13.55□□□□□ -0.24
CTSB-230ENST00000534149 MSTNO14793 375 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 CBR3O75828 277 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 TGM6O95932 706 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 RHOXF2BP0C7M4 288 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 S1PR1P21453 382 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 CRYGSP22914 178 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 TCEA1P23193 301 aaKnown RBP13.54□□□□□ -0.24
CTSB-230ENST00000534149 CHMP24386 653 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 SSTR1P30872 391 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 CCKARP32238 428 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 GP5P40197 560 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 MC3RP41968 323 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 LHX2P50458 406 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 XKP51811 444 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 GFRA1P56159 465 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 PLCXD2Q0VAA5 305 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 CBLBQ13191 982 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 CUL3Q13618 768 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 CPSF6Q16630 551 aaKnown RBP eCLIP13.54□□□□□ -0.24
CTSB-230ENST00000534149 LIPJQ5W064 366 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 VWA1Q6PCB0 445 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 RAPH1Q70E73 1250 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 NUP54Q7Z3B4 507 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 CMC1Q7Z7K0 106 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 WDSUB1Q8N9V3 476 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 OR7G1Q8NGA0 311 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 OR4K14Q8NGD5 310 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 CDKL2Q92772 493 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 HS3ST6Q96QI5 342 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 MED18Q9BUE0 208 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 ZNF226Q9NYT6 803 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 TAS2R10Q9NYW0 307 aa13.54□□□□□ -0.24
CTSB-230ENST00000534149 CHD3Q12873 2000 aaKnown RBP13.54□□□□□ -0.24
CTSB-230ENST00000534149 PRAMEF25A6NGN4 478 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 LRRC14BA6NHZ5 514 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 H0YIV9 168 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 UGT2B11O75310 529 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 CNOT4O95628 575 aaKnown RBP13.53□□□□□ -0.24
CTSB-230ENST00000534149 MTHFD2P13995 350 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 CPMP14384 443 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 NAGAP17050 411 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 CD79BP40259 229 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 PIK3CGP48736 1102 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 NEK2P51955 445 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 CLDN18P56856 261 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 EEF1A1P68104 462 aaKnown RBP13.53□□□□□ -0.24
CTSB-230ENST00000534149 SNTA1Q13424 505 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 EXOSC7Q15024 291 aaKnown RBP13.53□□□□□ -0.24
CTSB-230ENST00000534149 EEF1A1P5Q5VTE0 462 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 FAM111BQ6SJ93 734 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 SCIMPQ6UWF3 145 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 C20orf204Q6ZNR8 217 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 ZNF550Q7Z398 422 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 P4HA3Q7Z4N8 544 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 CNEP1R1Q8N9A8 125 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 NANOS1Q8WY41 292 aaKnown RBP13.53□□□□□ -0.24
CTSB-230ENST00000534149 REPS1Q96D71 796 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 STARD4Q96DR4 205 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 SFXN2Q96NB2 322 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 BRINP2Q9C0B6 783 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 OPN3Q9H1Y3 402 aaPredicted RBP13.53□□□□□ -0.24
CTSB-230ENST00000534149 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 BCAP29Q9UHQ4 241 aa13.53□□□□□ -0.24
CTSB-230ENST00000534149 TCRBV9S1A1TA0A576 114 aa13.52□□□□□ -0.25
CTSB-230ENST00000534149 EFCAB8A8MWE9 144 aa13.52□□□□□ -0.25
CTSB-230ENST00000534149 HCRTR2O43614 444 aa13.52□□□□□ -0.25
CTSB-230ENST00000534149 PORP16435 677 aaPredicted RBP13.52□□□□□ -0.25
CTSB-230ENST00000534149 PTH2RP49190 550 aa13.52□□□□□ -0.25
CTSB-230ENST00000534149 SLMAPQ14BN4 828 aa13.52□□□□□ -0.25
CTSB-230ENST00000534149 AAGABQ6PD74 315 aa13.52□□□□□ -0.25
CTSB-230ENST00000534149 ZNF474Q6S9Z5 364 aaPredicted RBP13.52□□□□□ -0.25
CTSB-230ENST00000534149 TBC1D1Q86TI0 1168 aaPredicted RBP13.52□□□□□ -0.25
CTSB-230ENST00000534149 WDR20Q8TBZ3 569 aa13.52□□□□□ -0.25
CTSB-230ENST00000534149 PGM2Q96G03 612 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms