RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 RFPL3SP0C7P2 107 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 NAGAP17050 411 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 PRPH2P23942 346 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 MPIP34949 423 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 DCAF7P61962 342 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 RPP38P78345 283 aaKnown RBP27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 NOXRED1Q6NXP6 359 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 KAT2AQ92830 837 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 JSRP1Q96MG2 331 aaPredicted RBP27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 MECRQ9BV79 373 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 TP63Q9H3D4 680 aaPredicted RBP27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 MYNNQ9NPC7 610 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 FIS1Q9Y3D6 152 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 PTGDR2Q9Y5Y4 395 aa27.81■■■□□ 2.04
SSSCA1-207ENST00000533115 OR14I1A6ND48 311 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 ESPNB1AK53 854 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 NPIPB8E9PQR5 432 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 ACOX3O15254 700 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 RGS14O43566 566 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 SUSD5O60279 629 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 NPHS1O60500 1241 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 TRIM3O75382 744 aaPredicted RBP27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 SEC22BO75396 215 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 ABCB1P08183 1280 aaPredicted RBP27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 PPICP45877 212 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 KIAA0040Q15053 153 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 EMC4Q5J8M3 183 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 TMEM198Q66K66 360 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 BICRALQ6AI39 1079 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 RNF165Q6ZSG1 346 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 TICAM1Q8IUC6 712 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 BBS4Q96RK4 519 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 LDAHQ9H6V9 325 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 NINQ8N4C6 2090 aa27.8■■■□□ 2.04
SSSCA1-207ENST00000533115 NOTCH2Q04721 2471 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 AQP7O14520 342 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 PPM1BO75688 479 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 DRD5P21918 477 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 HTR1EP28566 365 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 GRNP28799 593 aaKnown RBP27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 MAN2A2P49641 1150 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 GXYLT1Q4G148 440 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 KANK2Q63ZY3 851 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 FAM9CQ8IZT9 166 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 ZNF597Q96LX8 424 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 RILPQ96NA2 401 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 ANGPTL4Q9BY76 406 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 ANKRA2Q9H9E1 313 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 MIEF1Q9NQG6 463 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 C1orf109Q9NX04 203 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 QPCTLQ9NXS2 382 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 TAS2R7Q9NYW3 318 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 B4GALT7Q9UBV7 327 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 EXPH5Q8NEV8 1989 aa27.79■■■□□ 2.04
SSSCA1-207ENST00000533115 MYO1GB0I1T2 1018 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 BCKDKO14874 412 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 HCN1O60741 890 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 SNX4O95219 450 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 CHEK2O96017 543 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 CREB1P16220 341 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 CASP3P42574 277 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 PRSS53Q2L4Q9 553 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 ZNF630Q2M218 657 aaPredicted RBP27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 TMEM211Q6ICI0 200 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 Q6ZSR9 355 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 IKBIPQ70UQ0 350 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 HOMEZQ8IX15 550 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 OMA1Q96E52 524 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 TUBB1Q9H4B7 451 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 LRTM1Q9HBL6 345 aa27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 GPR55Q9Y2T6 319 aaPredicted RBP27.78■■■□□ 2.04
SSSCA1-207ENST00000533115 TRGV5A0A0B4J1U4 118 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 FRG2CA6NGY1 282 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 CLDN14O95500 239 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 CHRNGP07510 517 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 FGF4P08620 206 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 PLCXD2Q0VAA5 305 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 CDSNQ15517 529 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 ARL13AQ5H913 290 aaPredicted RBP27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 NUP54Q7Z3B4 507 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 MARVELD2Q8N4S9 558 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 OR5M9Q8NGP3 310 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 OR2T11Q8NH01 316 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 EXO5Q9H790 373 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 EML4Q9HC35 981 aaKnown RBP27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 ACKR4Q9NPB9 350 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 PNPLA3Q9NST1 481 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 SENP1Q9P0U3 644 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 RAB21Q9UL25 225 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 EXO1Q9UQ84 846 aaKnown RBP27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 DNAJC15Q9Y5T4 150 aa27.77■■■□□ 2.04
SSSCA1-207ENST00000533115 ITPR2Q14571 2701 aa27.76■■■□□ 2.04
SSSCA1-207ENST00000533115 TO15178 435 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 PLOD3O60568 738 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 NEFHP12036 1026 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 NCBP2P52298 156 aaKnown RBP eCLIP27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 KRT71Q3SY84 523 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 PACS2Q86VP3 889 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 OR7G2Q8NG99 324 aa27.76■■■□□ 2.03
SSSCA1-207ENST00000533115 HGDQ93099 445 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms