RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 GPR143P51810 404 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 UBE2NP61088 152 aaKnown RBP7.52□□□□□ -1.21
CTNND1-230ENST00000532245 XIAPP98170 497 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 EFR3AQ14156 821 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 STK11Q15831 433 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 DEFB109BQ30KR1 87 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 SPANXN2Q5MJ10 180 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 ALG1LQ6GMV1 187 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 ZNF595Q8IYB9 648 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 CDS1Q92903 461 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 PDLIM5Q96HC4 596 aaKnown RBP7.52□□□□□ -1.21
CTNND1-230ENST00000532245 BIRC8Q96P09 236 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 TMEM5Q9Y2B1 443 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 TRIP12Q14669 1992 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-230ENST00000532245 CEACAM5P06731 702 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 SDC1P18827 310 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 FUT4P22083 530 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 SMSP52788 366 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 GFERP55789 205 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 KCNC4Q03721 635 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 MRPL49Q13405 166 aaKnown RBP7.52□□□□□ -1.21
CTNND1-230ENST00000532245 GPNMBQ14956 572 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 ALG10BQ5I7T1 473 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 CHCHD4Q8N4Q1 142 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 THOC3Q96J01 351 aaKnown RBP7.52□□□□□ -1.21
CTNND1-230ENST00000532245 SLC6A16Q9GZN6 736 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 COQ10BQ9H8M1 238 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 MTHFD2LQ9H903 347 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-230ENST00000532245 ING3Q9NXR8 418 aa7.52□□□□□ -1.21
CTNND1-230ENST00000532245 PTBP2Q9UKA9 531 aaKnown RBP7.52□□□□□ -1.21
CTNND1-230ENST00000532245 TTLL8A6PVC2 850 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 PDLIM1O00151 329 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 PGRMC2O15173 223 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 KLK10O43240 276 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 VNN2O95498 520 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 HMGN2P05204 90 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 CLUP10909 449 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 MAOAP21397 527 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 BCKDHBP21953 392 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SSR4P51571 173 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 GABREP78334 506 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 CDKL1Q00532 357 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SF3B4Q15427 424 aaKnown RBP eCLIP7.51□□□□□ -1.211e-7■■■□□ 16.9
CTNND1-230ENST00000532245 SF3A2Q15428 464 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 CCNJQ5T5M9 372 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 RSBN1Q5VWQ0 802 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 FAM83HQ6ZRV2 1179 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 ZNF440Q8IYI8 595 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 CHRDQ9H2X0 955 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SPHK1Q9NYA1 384 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 NDUFA13Q9P0J0 144 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SLC23A2Q9UGH3 650 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 C15orf41Q9Y2V0 281 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 COMMD3-BMI1R4GMX3 469 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 CKMT2P17540 419 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 PEX2P28328 305 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 BCL6P41182 706 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 RAB15P59190 212 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 TRIP6Q15654 476 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 MAPK11Q15759 364 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 ZSWIM7Q19AV6 140 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 GTDC1Q4AE62 458 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 NKAIN1Q4KMZ8 207 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 TPRG1LQ5T0D9 272 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 FCRLBQ6BAA4 426 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 CYP4V2Q6ZWL3 525 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 CLIP4Q8N3C7 705 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 OR8J3Q8NGG0 315 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 ERMAPQ96PL5 475 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 MFRPQ9BY79 579 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 CLK4Q9HAZ1 481 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 NANSQ9NR45 359 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 STMN3Q9NZ72 180 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SLC7A8Q9UHI5 535 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 PAIP2BQ9ULR5 123 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 EME2A4GXA9 379 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 ABCB7O75027 752 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 PRKRAO75569 313 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SEMA3DO95025 777 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SPARCP09486 303 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 DYNC1I2Q13409 638 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 IQCCQ4KMZ1 466 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 KHDC1Q4VXA5 237 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 RNASE12Q5GAN4 147 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 BLOC1S3Q6QNY0 202 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 TMEM64Q6YI46 380 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 PEG10Q86TG7 708 aaKnown RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 OR14A16Q8NHC5 309 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 IER2Q9BTL4 223 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SLC24A3Q9HC58 644 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 ACTR3BQ9P1U1 418 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 STOML2Q9UJZ1 356 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 CBLCQ9ULV8 474 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 OAZ3Q9UMX2 235 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 BOKQ9UMX3 212 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 ATAD5Q96QE3 1844 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 LMO7DNF2Z398 122 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 SOCS2O14508 198 aa7.51□□□□□ -1.21
CTNND1-230ENST00000532245 TLX2O43763 284 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-230ENST00000532245 PIAS2O75928 621 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms