RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CROCCP3Q8IVE0 287 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 OR51A7Q8NH64 312 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 CRELD1Q96HD1 420 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 FEVQ99581 238 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 COMMD4Q9H0A8 199 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 NEU3Q9UQ49 428 aa14.23□□□□□ -0.13
USP47-207ENST00000527733 FURINP09958 794 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 BCL6P41182 706 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 TSFMP43897 325 aaKnown RBP14.22□□□□□ -0.13
USP47-207ENST00000527733 RAB38P57729 211 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 TNFRSF17Q02223 184 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 CRTC2Q53ET0 693 aaPredicted RBP14.22□□□□□ -0.13
USP47-207ENST00000527733 OGFRL1Q5TC84 451 aaPredicted RBP14.22□□□□□ -0.13
USP47-207ENST00000527733 MEDAGQ5VYS4 303 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 RPL13AP3Q6NVV1 102 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 IZUMO1Q8IYV9 350 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 FANK1Q8TC84 345 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 CREB3L4Q8TEY5 395 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 CHTF18Q8WVB6 975 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 ZNF559Q9BR84 538 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 TEX10Q9NXF1 929 aaPredicted RBP14.22□□□□□ -0.13
USP47-207ENST00000527733 GRHPRQ9UBQ7 328 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 RPLP0P05388 317 aaKnown RBP14.22□□□□□ -0.13
USP47-207ENST00000527733 CD2P06729 351 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 TACSTD2P09758 323 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 PAX7P23759 505 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 BTBD16Q32M84 506 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 SATL1Q86VE3 508 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 PELI3Q8N2H9 469 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.22□□□□□ -0.13
USP47-207ENST00000527733 SERGEFQ9UGK8 458 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 SLC17A4Q9Y2C5 497 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 TRPM7Q96QT4 1865 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 METTL12A8MUP2 240 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 CD63P08962 238 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 TEAD1P28347 426 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 GBX2P52951 348 aaPredicted RBP14.22□□□□□ -0.13
USP47-207ENST00000527733 GPLD1P80108 840 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 UGT8Q16880 541 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 MANEAQ5SRI9 462 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 SHISA6Q6ZSJ9 500 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 ADGRG5Q8IZF4 528 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 TOR1AIP2Q8NFQ8 470 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 OR2T33Q8NG76 320 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 OR4K5Q8NGD3 323 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 ASB12Q8WXK4 309 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 DIO2Q92813 273 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 SGPP1Q9BX95 441 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 WSB2Q9NYS7 404 aaPredicted RBP14.22□□□□□ -0.13
USP47-207ENST00000527733 TRAPPC13A5PLN9 417 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 TARM1B6A8C7 271 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 CASC3O15234 703 aaKnown RBP14.22□□□□□ -0.13
USP47-207ENST00000527733 TNFRSF1BP20333 461 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 HOXC12P31275 282 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 FOLR3P41439 243 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 NPRL3Q12980 569 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 SLC36A3Q495N2 470 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 ATCAYQ86WG3 371 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 CCL4L1Q8NHW4 92 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 PATE1Q8WXA2 126 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 PPP1R14AQ96A00 147 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 RBP7Q96R05 134 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 SLC39A1Q9NY26 324 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 DNAJC27Q9NZQ0 273 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 ASB1Q9Y576 335 aa14.22□□□□□ -0.13
USP47-207ENST00000527733 IGLV3-16A0A075B6K0 115 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 RCVRNP35243 200 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 ASIC5Q9NY37 505 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 CNOT11Q9UKZ1 510 aaKnown RBP14.21□□□□□ -0.13
USP47-207ENST00000527733 PTRH2Q9Y3E5 179 aaKnown RBP14.21□□□□□ -0.13
USP47-207ENST00000527733 SNX4O95219 450 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 CBLP22681 906 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 SLC9A3P48764 834 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 ARFIP1P53367 373 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 CRISP1P54107 249 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 PMS2P3Q13401 168 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 ALG10BQ5I7T1 473 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 GARNL3Q5VVW2 1013 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 SPNS2Q8IVW8 549 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 SMRP1Q8NCR6 262 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 OR52R1Q8NGF1 315 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 OR6N1Q8NGY5 312 aa14.21□□□□□ -0.13
USP47-207ENST00000527733 ZNF419Q96HQ0 510 aaPredicted RBP14.21□□□□□ -0.13
USP47-207ENST00000527733 POLDIP3Q9BY77 421 aaKnown RBP14.21□□□□□ -0.13
USP47-207ENST00000527733 A0A1W2PRG6 482 aa14.21□□□□□ -0.14
USP47-207ENST00000527733 ADAP00813 363 aa14.21□□□□□ -0.14
USP47-207ENST00000527733 CD36P16671 472 aa14.21□□□□□ -0.14
USP47-207ENST00000527733 DLX2Q07687 328 aaPredicted RBP14.21□□□□□ -0.14
USP47-207ENST00000527733 CRYZQ08257 329 aaKnown RBP14.21□□□□□ -0.14
USP47-207ENST00000527733 FUNDC1Q8IVP5 155 aa14.21□□□□□ -0.14
USP47-207ENST00000527733 OR51Q1Q8NH59 317 aa14.21□□□□□ -0.14
USP47-207ENST00000527733 UTP4Q969X6 686 aaKnown RBP14.21□□□□□ -0.14
USP47-207ENST00000527733 SGTBQ96EQ0 304 aa14.21□□□□□ -0.14
USP47-207ENST00000527733 ZNF300Q96RE9 604 aaPredicted RBP14.21□□□□□ -0.14
USP47-207ENST00000527733 CPPED1Q9BRF8 314 aaPredicted RBP14.21□□□□□ -0.14
USP47-207ENST00000527733 PINK1Q9BXM7 581 aa14.21□□□□□ -0.14
USP47-207ENST00000527733 SOX17Q9H6I2 414 aaPredicted RBP14.21□□□□□ -0.14
USP47-207ENST00000527733 LDAHQ9H6V9 325 aa14.21□□□□□ -0.14
USP47-207ENST00000527733 BTBD3Q9Y2F9 522 aa14.21□□□□□ -0.14
USP47-207ENST00000527733 UNC119BA6NIH7 251 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms