RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 NTSP30990 170 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 TRHRP34981 398 aaPredicted RBP9.96□□□□□ -0.82
NEDD8-205ENST00000527046 CCT3P49368 545 aaKnown RBP9.96□□□□□ -0.82
NEDD8-205ENST00000527046 CORO7P57737 925 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 MFAP5Q13361 173 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 TIGD2Q4W5G0 525 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 CRB2Q5IJ48 1285 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 LRIF1Q5T3J3 769 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 ANXA8L1Q5VT79 327 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 ISLR2Q6UXK2 745 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 TMEM64Q6YI46 380 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 RNF111Q6ZNA4 994 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 MTDHQ86UE4 582 aaKnown RBP9.96□□□□□ -0.82
NEDD8-205ENST00000527046 LGI4Q8N135 537 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 BEST3Q8N1M1 668 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 C10orf111Q8N326 155 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 RBMXL3Q8N7X1 1067 aaKnown RBP9.96□□□□□ -0.82
NEDD8-205ENST00000527046 ANKS4BQ8N8V4 417 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 CATSPER1Q8NEC5 780 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 OR4N2Q8NGD1 307 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 HAS2Q92819 552 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 TP53INP1Q96A56 240 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 SPDL1Q96EA4 605 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 MAGED4Q96JG8 741 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 LMF2Q9BU23 707 aaKnown RBP9.96□□□□□ -0.82
NEDD8-205ENST00000527046 SLC25A23Q9BV35 468 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 ITPAQ9BY32 194 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 WWTR1Q9GZV5 400 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 FOLH1BQ9HBA9 442 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 BCAP29Q9UHQ4 241 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 TRIM33Q9UPN9 1127 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 KCNE3Q9Y6H6 103 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 EPG5Q9HCE0 2579 aa9.96□□□□□ -0.82
NEDD8-205ENST00000527046 EXPH5Q8NEV8 1989 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 C2orf92A0A1B0GVN3 265 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 A0A1W2PP18 115 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 CCDC154A6NI56 674 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 TO15178 435 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ITGA10O75578 1167 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 NEURL1O76050 574 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 SLITRK5O94991 958 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 HMGN2P05204 90 aaKnown RBP9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ZCCHC18P0CG32 403 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ADSLP30566 484 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-205ENST00000527046 PPICP45877 212 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 KCNAB2Q13303 367 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 LY6DQ14210 128 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 MEP1AQ16819 746 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ZNF791Q3KP31 576 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-205ENST00000527046 AGAP7PQ5VUJ5 663 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 SAXO2Q658L1 398 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 MFSD12Q6NUT3 480 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 LINC00696Q6ZRV3 163 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 MSANTD1Q6ZTZ1 278 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 C6orf120Q7Z4R8 191 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 DPP10Q8N608 796 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 SLC16A11Q8NCK7 471 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 MDS2Q8NDY4 140 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 C17orf47Q8NEP4 570 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 NUP43Q8NFH3 380 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 OR5AK3PQ8NH89 298 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ZFP28Q8NHY6 868 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ZFP90Q8TF47 636 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 TSPEARQ8WU66 669 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 WBP1Q96G27 269 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 SLC35A4Q96G79 324 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ART5Q96L15 291 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ZNF354BQ96LW1 612 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 AGAP4Q96P64 663 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 SIGLEC12Q96PQ1 595 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 BTBD9Q96Q07 612 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 RASL10BQ96S79 203 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ADNPQ9H2P0 1102 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 PROK2Q9HC23 129 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 SH2D2AQ9NP31 389 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 TUBD1Q9UJT1 453 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 LHX6Q9UPM6 363 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 TP53TG5Q9Y2B4 290 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 GMEB1Q9Y692 573 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 ITPR1Q14643 2758 aa9.95□□□□□ -0.82
NEDD8-205ENST00000527046 GXYLT2A0PJZ3 443 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 ERVH48-1M5A8F1 160 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 NR5A2O00482 541 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 PRAMEF2O60811 474 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 BCAS2O75934 225 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-205ENST00000527046 OR6B1O95007 311 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 NKX2-2O95096 273 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 UNC5CO95185 931 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 F10P00742 488 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 IGKV1D-16P01601 117 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 ALPPP05187 535 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 ABCB1P08183 1280 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-205ENST00000527046 UQCRC2P22695 453 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 SOX3P41225 446 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 TRPC1P48995 793 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 NR0B1P51843 470 aaKnown RBP9.94□□□□□ -0.82
NEDD8-205ENST00000527046 STX1BP61266 288 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 TUBA3CQ13748 450 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 MAPK11Q15759 364 aa9.94□□□□□ -0.82
NEDD8-205ENST00000527046 DUSP5Q16690 384 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms