RNA–Protein interactions for RNA: ENST00000525045.5

PABPC4-219, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 2

Gene PABPC4, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-219	ENST00000525045	C10orf62	Q5T681	223 aa	Predicted RBP	12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	GTF2H2C	Q6P1K8	395 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	CHMP1B	Q7LBR1	199 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	TRIM42	Q8IWZ5	723 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	PRR22	Q8IZ63	422 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	L3MBTL4	Q8NA19	623 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	SLC44A1	Q8WWI5	657 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	ZNF592	Q92610	1267 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	TMCO6	Q96DC7	493 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	LCOR	Q96JN0	433 aa	Predicted RBP	12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	COX4I2	Q96KJ9	171 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	OR2B2	Q9GZK3	357 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	NXF5	Q9H1B4	397 aa	Known RBP	12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	IPPK	Q9H8X2	491 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	KLRF1	Q9NZS2	232 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	RNF14	Q9UBS8	474 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	PACSIN3	Q9UKS6	424 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	PSME2	Q9UL46	239 aa		12.84	□□□□□ -0.35
PABPC4-219	ENST00000525045	JMJD1C	Q15652	2540 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045		A0A087X1B8	175 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	MSTN	O14793	375 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	CLDN9	O95484	217 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	MTHFD2	P13995	350 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	PLCXD2	Q0VAA5	305 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	MAP4K2	Q12851	820 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	SLMAP	Q14BN4	828 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	ACAP2	Q15057	778 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	PFKFB4	Q16877	469 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	CMC1	Q7Z7K0	106 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	IFNE	Q86WN2	208 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	CREG2	Q8IUH2	290 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	GRAMD2A	Q8IUY3	354 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	VWA5B2	Q8N398	1253 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	PPM1N	Q8N819	430 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	WDR20	Q8TBZ3	569 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	TRPC4AP	Q8TEL6	797 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	HGD	Q93099	445 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	ATP6V1E2	Q96A05	226 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	NXNL1	Q96CM4	212 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	OMA1	Q96E52	524 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	WHRN	Q9P202	907 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	PRODH2	Q9UF12	536 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	BCAP29	Q9UHQ4	241 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	DLGAP4	Q9Y2H0	992 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	TESMIN	Q9Y4I5	508 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	SAR1B	Q9Y6B6	198 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045	EXPH5	Q8NEV8	1989 aa		12.83	□□□□□ -0.36
PABPC4-219	ENST00000525045		A0A1W2PPR1	153 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	C1orf226	A1L170	272 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	CTIF	O43310	598 aa	Known RBP	12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	S1PR1	P21453	382 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	SRD5A2	P31213	254 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	MC3R	P41968	323 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	PPIC	P45877	212 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	PPP2R2B	Q00005	443 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	NAB1	Q13506	487 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	BCL2A1	Q16548	175 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	ACKR1	Q16570	336 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	CCNYL2	Q5T2Q4	361 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	OR2A2	Q6IF42	318 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	KLC3	Q6P597	504 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	P4HA3	Q7Z4N8	544 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	PLCZ1	Q86YW0	608 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	GBP7	Q8N8V2	638 aa	Predicted RBP	12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	NODAL	Q96S42	347 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	BRINP2	Q9C0B6	783 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	SERHL	Q9NQF3	203 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	TAS2R10	Q9NYW0	307 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	CLCF1	Q9UBD9	225 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	MAPRE3	Q9UPY8	281 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	RNF11	Q9Y3C5	154 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	FN1	P02751	2386 aa	Known RBP	12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	HIVEP2	P31629	2446 aa		12.82	□□□□□ -0.36
PABPC4-219	ENST00000525045	RTTN	Q86VV8	2226 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	NSD1	Q96L73	2696 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	FAM187A	A6NFU0	413 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	PRAMEF25	A6NGN4	478 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045		H7C1Q1	480 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	PLOD2	O00469	737 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	BCAS2	O75934	225 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	GBA	P04062	536 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	ATP1B1	P05026	303 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	KLK1	P06870	262 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	CSNK2A2	P19784	350 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	DRD5	P21918	477 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	STX2	P32856	288 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	SOX18	P35713	384 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	CD79B	P40259	229 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	ARL1	P40616	181 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	PTGDS	P41222	190 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	NEK2	P51955	445 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	GFRA1	P56159	465 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	PSPH	P78330	225 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	PRICKLE4	Q2TBC4	344 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	TTC19	Q6DKK2	380 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	C20orf204	Q6ZNR8	217 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	GOLGA7	Q7Z5G4	137 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	GCNT2	Q8N0V5	402 aa		12.81	□□□□□ -0.36
PABPC4-219	ENST00000525045	WDSUB1	Q8N9V3	476 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms