RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 NUP54Q7Z3B4 507 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 GOLGA7Q7Z5G4 137 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 OR7G1Q8NGA0 311 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 ATP6V1E2Q96A05 226 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 MRRFQ96E11 262 aaKnown RBP23.56■■□□□ 1.36
PVT1-219ENST00000523427 MDFIQ99750 246 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 CPSF2Q9P2I0 782 aaKnown RBP23.56■■□□□ 1.36
PVT1-219ENST00000523427 FETUBQ9UGM5 382 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 ACOT9Q9Y305 439 aa23.56■■□□□ 1.36
PVT1-219ENST00000523427 FBN3Q75N90 2809 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 CCDC188H7C350 402 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 CDH16O75309 829 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 SMNDC1O75940 238 aaKnown RBP eCLIP23.55■■□□□ 1.36
PVT1-219ENST00000523427 SIX3O95343 332 aaPredicted RBP23.55■■□□□ 1.36
PVT1-219ENST00000523427 PORP16435 677 aaPredicted RBP23.55■■□□□ 1.36
PVT1-219ENST00000523427 FEN1P39748 380 aaKnown RBP23.55■■□□□ 1.36
PVT1-219ENST00000523427 PTGDSP41222 190 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 DIO3P55073 304 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 GRAMD2AQ8IUY3 354 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 LRRN4CLQ8ND94 238 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 SIMC1Q8NDZ2 872 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 WDR20Q8TBZ3 569 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 WNT2BQ93097 391 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 HGDQ93099 445 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 SERPINI1Q99574 410 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 UBTD1Q9HAC8 227 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 KLHL28Q9NXS3 571 aa23.55■■□□□ 1.36
PVT1-219ENST00000523427 EXO1Q9UQ84 846 aaKnown RBP23.55■■□□□ 1.36
PVT1-219ENST00000523427 A8MXE2 369 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 UGT2B11O75310 529 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 ERAL1O75616 437 aaKnown RBP23.54■■□□□ 1.36
PVT1-219ENST00000523427 S1PR1P21453 382 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 DEKP35659 375 aaKnown RBP23.54■■□□□ 1.36
PVT1-219ENST00000523427 PAFAH1B1P43034 410 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 FAM27E3Q08E93 113 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 CCNYL2Q5T2Q4 361 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 IFNEQ86WN2 208 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 CCDC25Q86WR0 208 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 WDSUB1Q8N9V3 476 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 C17orf47Q8NEP4 570 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 ADCY4Q8NFM4 1077 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 COX4I2Q96KJ9 171 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 ZFP3Q96NJ6 502 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 G6PC3Q9BUM1 346 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 PIGMQ9H3S5 423 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 TAS2R10Q9NYW0 307 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 PACSIN3Q9UKS6 424 aa23.54■■□□□ 1.36
PVT1-219ENST00000523427 PRAMEF25A6NGN4 478 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 FOXE1O00358 373 aaPredicted RBP23.53■■□□□ 1.36
PVT1-219ENST00000523427 PLOD2O00469 737 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 CBR3O75828 277 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 NAGAP17050 411 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 ALDH18A1P54886 795 aaKnown RBP23.53■■□□□ 1.36
PVT1-219ENST00000523427 GNG11P61952 73 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 SGO1Q5FBB7 561 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 TTC19Q6DKK2 380 aaPredicted RBP23.53■■□□□ 1.36
PVT1-219ENST00000523427 OR5M10Q6IEU7 315 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 FAM180BQ6P0A1 224 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 CENPLQ8N0S6 344 aaPredicted RBP23.53■■□□□ 1.36
PVT1-219ENST00000523427 NTNG2Q96CW9 530 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 PIK3IP1Q96FE7 263 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 PERPQ96FX8 193 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 LCORQ96JN0 433 aaPredicted RBP23.53■■□□□ 1.36
PVT1-219ENST00000523427 WFIKKN1Q96NZ8 548 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 FAM111AQ96PZ2 611 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 MRPL1Q9BYD6 325 aaKnown RBP23.53■■□□□ 1.36
PVT1-219ENST00000523427 ACBD3Q9H3P7 528 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 NOL11Q9H8H0 719 aaKnown RBP23.53■■□□□ 1.36
PVT1-219ENST00000523427 TESMINQ9Y4I5 508 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 SAR1BQ9Y6B6 198 aa23.53■■□□□ 1.36
PVT1-219ENST00000523427 EIF3HO15372 352 aaKnown RBP eCLIP23.52■■□□□ 1.363e-12■■■■■ 53.6
PVT1-219ENST00000523427 UGDHO60701 494 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 CLDN9O95484 217 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 TGM6O95932 706 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 CBLBQ13191 982 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 GAB1Q13480 694 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 CYS1Q717R9 158 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 P4HA3Q7Z4N8 544 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 YTHDF3Q7Z739 585 aaKnown RBP23.52■■□□□ 1.36
PVT1-219ENST00000523427 CNEP1R1Q8N9A8 125 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 FBF1Q8TES7 1133 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 PIGTQ969N2 578 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 SFXN2Q96NB2 322 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 OR2B2Q9GZK3 357 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 CLCF1Q9UBD9 225 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 CFL2Q9Y281 166 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 PLLPQ9Y342 182 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 WIF1Q9Y5W5 379 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 EXPH5Q8NEV8 1989 aa23.52■■□□□ 1.36
PVT1-219ENST00000523427 CSPG4Q6UVK1 2322 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 TRIM64A6NGJ6 449 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 TRIM64BA6NI03 449 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 C2P06681 752 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 MAPK12P53778 367 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 FAM83EQ2M2I3 478 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 PRICKLE4Q2TBC4 344 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 MROH9Q5TGP6 573 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 ADGRE4PQ86SQ3 457 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 L3MBTL4Q8NA19 623 aa23.51■■□□□ 1.35
PVT1-219ENST00000523427 OR52R1Q8NGF1 315 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms