RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 PAQR8Q8TEZ7 354 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 AENQ8WTP8 325 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 CHTF18Q8WVB6 975 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.54□□□□□ -1.043e-6■■■■■ 50.8
CTNNA1-221ENST00000520339 RBM18Q96H35 190 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 FBXL20Q96IG2 436 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 SMC6Q96SB8 1091 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 MTERF1Q99551 399 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 CENPKQ9BS16 269 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 DDX31Q9H8H2 851 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 PROK2Q9HC23 129 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 MCCC2Q9HCC0 563 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 SNX15Q9NRS6 342 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 PNPLA3Q9NST1 481 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 SACM1LQ9NTJ5 587 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 TUBA8Q9NY65 449 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 PSD3Q9NYI0 1048 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 COPS7AQ9UBW8 275 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 PHF11Q9UIL8 331 aa8.54□□□□□ -1.04
CTNNA1-221ENST00000520339 NCOA6Q14686 2063 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 A0A096LPK6 155 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ATP6AP2A0A1C7CYW4 349 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 A0A1W2PR48 441 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 FAM90A27PA6NNH2 459 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 FOXE1O00358 373 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 AQP7O14520 342 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 GSC2O15499 205 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ATP8B1O43520 1251 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 DYRK3O43781 588 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 UGDHO60701 494 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 HCN1O60741 890 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ATP6AP2O75787 350 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 KLHL2O95198 593 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 P04436 131 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 THBDP07204 575 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 GLI4P10075 376 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 GFAPP14136 432 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ACVR2AP27037 513 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 TLX1P31314 330 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 PIGAP37287 484 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 MAGEA5P43359 124 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 DNASE1L1P49184 302 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 GSK3AP49840 483 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 RAP1GDS1P52306 607 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ALDH18A1P54886 795 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 PLIN5Q00G26 463 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 CUL3Q13618 768 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 TESK1Q15569 626 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 FAM83EQ2M2I3 478 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 BEND6Q5SZJ8 279 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 SLC22A10Q63ZE4 541 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 RTL6Q6ICC9 239 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ZNF585AQ6P3V2 769 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 FAM47EQ6ZV65 393 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ST13P4Q8IZP2 240 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 L3MBTL4Q8NA19 623 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 WDR20Q8TBZ3 569 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 CHAC2Q8WUX2 184 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 IFT81Q8WYA0 676 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 UCN3Q969E3 161 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 SPACA9Q96E40 222 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 C1orf159Q96HA4 380 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ART5Q96L15 291 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 TTYH2Q9BSA4 534 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ACTR8Q9H981 624 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 KCNJ16Q9NPI9 418 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ZDHHC18Q9NUE0 388 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ZNF446Q9NWS9 450 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ITGB1BP2Q9UKP3 347 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 RNF11Q9Y3C5 154 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 TRAF6Q9Y4K3 522 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 ANGPTL3Q9Y5C1 460 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 TNPO3Q9Y5L0 923 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 FAM215AQ9Y5M1 114 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 SPG11Q96JI7 2443 aa8.53□□□□□ -1.04
CTNNA1-221ENST00000520339 AKAP9Q99996 3911 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 IQANK1A0A1B0GTG1 560 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 NKX2-6A6NCS4 301 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 LRRC3CA6NJW4 275 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 GLOD5A6NK44 160 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 PGRMC2O15173 223 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 SIX3O95343 332 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 ALDOAP04075 364 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 CLPSP04118 112 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 HOXD4P09016 255 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 H2AFB1P0C5Y9 115 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 H2AFB2P0C5Z0 115 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 FAM58BPP0C7Q3 252 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 SLC35E2P0CK97 266 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 NEFHP12036 1026 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 ENDOUP21128 410 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 GALNSP34059 522 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 BUD31P41223 144 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 NEK2P51955 445 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 SLC37A1P57057 533 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 PCBP3P57721 371 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 HERVK_113P63132 956 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 ERVK-8P63133 956 aa8.52□□□□□ -1.05
CTNNA1-221ENST00000520339 GTF2H2Q13888 395 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms