RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 IFNA16P05015 189 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 OPN1MW2P0DN77 364 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 OPN1MW3P0DN78 364 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 SERPINB3P29508 390 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 GJC1P36383 396 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 CLDN20P56880 219 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 TAS2R40P59535 323 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 ID2Q02363 134 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 ZP4Q12836 540 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 BAMBIQ13145 260 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 HLXQ14774 488 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 ZNF628Q5EBL2 1059 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 SFRP5Q5T4F7 317 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 SPATC1Q76KD6 591 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 SLC15A4Q8N697 577 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 ZNF540Q8NDQ6 660 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 OR1J4Q8NGS1 313 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 OR14A16Q8NHC5 309 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 WDR89Q96FK6 387 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 SENP5Q96HI0 755 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 RNF157Q96PX1 679 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 ALOXE3Q9BYJ1 711 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 NARFLQ9H6Q4 476 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 TAS2R10Q9NYW0 307 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 GALPQ9UBC7 116 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 SAE1Q9UBE0 346 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 ZNF69Q9UC07 566 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 FBXL2Q9UKC9 423 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 GRIP1Q9Y3R0 1128 aa5.9□□□□□ -1.46
CTNNA1-216ENST00000519489 DYNC1H1Q14204 4646 aaKnown RBP5.9□□□□□ -1.47
CTNNA1-216ENST00000519489 A0A0G2JN53 185 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 GOLGA6L10A6NI86 522 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 C3orf70A6NLC5 250 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 GOLGA6L19H0YKK7 550 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 PSMD12O00232 456 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SS18L1O75177 396 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 CCNDBP1O95273 360 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 APOA4P06727 396 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 GAAP10253 952 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 CHRM3P20309 590 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 EDNRAP25101 427 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 PSMA3P25788 255 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 MTIF2P46199 727 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 HSD17B7P56937 341 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 LMO4P61968 165 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SLC13A2Q13183 592 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 MPP3Q13368 585 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SPARCL1Q14515 664 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 GBX1Q14549 363 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 KCNJ11Q14654 390 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 BCL2A1Q16548 175 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 DMRTC1Q5HYR2 192 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 FOXB2Q5VYV0 432 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SLC9A4Q6AI14 798 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 ZNF544Q6NX49 715 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SLC22A25Q6T423 547 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SCIMPQ6UWF3 145 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 ADAMTSL5Q6ZMM2 481 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 ZNF534Q76KX8 674 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 IFNEQ86WN2 208 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 CCDC25Q86WR0 208 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 ZCCHC24Q8N2G6 241 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 RAB42Q8N4Z0 105 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SKA2Q8WVK7 121 aaPredicted RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SGCDQ92629 289 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 DAZLQ92904 295 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 PHF21AQ96BD5 680 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 FBXO17Q96EF6 278 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SFXN2Q96NB2 322 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 NODALQ96S42 347 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 SERINC2Q96SA4 455 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 EBNA1BP2Q99848 306 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 NGBQ9NPG2 151 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 UTP6Q9NYH9 597 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 TREM2Q9NZC2 230 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 RSPH14Q9UHP6 348 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 PTBP2Q9UKA9 531 aaKnown RBP5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 ZNF175Q9Y473 711 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 FKBP7Q9Y680 259 aa5.89□□□□□ -1.47
CTNNA1-216ENST00000519489 CLPSL1A2RUU4 121 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 C5orf63A6NC05 138 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 CLDN34H7C241 214 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 DHHO43323 396 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 LDB3O75112 727 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 ICOSLGO75144 302 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 PSIP1O75475 530 aaKnown RBP5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 CRTAMO95727 393 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 SERPIND1P05546 499 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 SLC35G6P0C7Q6 338 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 ZSCAN22P10073 491 aaPredicted RBP5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 CDH1P12830 882 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 IMPA1P29218 277 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 MSH2P43246 934 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 RAG2P55895 527 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 PWP1Q13610 501 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 FGFBP1Q14512 234 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 ARHGAP19Q14CB8 494 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 RPS6KA2Q15349 733 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 RPS6KA1Q15418 735 aa5.88□□□□□ -1.47
CTNNA1-216ENST00000519489 ANKRD20A4Q4UJ75 823 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms