RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 STK19P49842 368 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-203ENST00000517490 IFITM2Q01629 132 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MLLT1Q03111 559 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MLC1Q15049 377 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 NUDT18Q6ZVK8 323 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 Q6ZVL8 140 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 PM20D2Q8IYS1 436 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 OR52I1Q8NGK6 324 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 SCAMP4Q969E2 229 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 CD180Q99467 661 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MFRPQ9BY79 579 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 DMRT3Q9NQL9 472 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 GPR52Q9Y2T5 361 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MED16Q9Y2X0 877 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 RBBP6Q7Z6E9 1792 aaKnown RBP6.32□□□□□ -1.4
CPNE3-203ENST00000517490 DOCK1Q14185 1865 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 TOXO94900 526 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 SELPP16109 830 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MMP12P39900 470 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 CENPAP49450 140 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 DEFA5Q01523 94 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MEF2AQ02078 507 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-203ENST00000517490 RGS1Q08116 209 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 SCRN3Q0VDG4 424 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 TMEM115Q12893 351 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-203ENST00000517490 OR2G6Q5TZ20 316 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 ZNF613Q6PF04 617 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 SHFQ7M4L6 423 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 SAMD14Q8IZD0 417 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MS4A15Q8N5U1 240 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 KAT2AQ92830 837 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 ZNF582Q96NG8 517 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MED18Q9BUE0 208 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 WRAP53Q9BUR4 548 aaKnown RBP6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MTG2Q9H4K7 406 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 ACOXLQ9NUZ1 547 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 MGAT4CQ9UBM8 478 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 SCP2D1Q9UJQ7 156 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 POLHQ9Y253 713 aa6.32□□□□□ -1.4
CPNE3-203ENST00000517490 TRIP11Q15643 1979 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FXYD6-FXYD2A0A087WZ82 144 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ARPC4-TTLL3A0A0A6YYG9 625 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TMEM129A0AVI4 362 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 H3BQ06 376 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 GABRPO00591 440 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 IGLV3-27P01718 113 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CLDN20P56880 219 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 LMAN2Q12907 356 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 GAB1Q13480 694 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 PTPRRQ15256 657 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FCN2Q15485 313 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FNDC3BQ53EP0 1204 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 YIF1BQ5BJH7 314 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ZMAT1Q5H9K5 638 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 COX20Q5RI15 118 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 PODNL1Q6PEZ8 512 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 COQ8AQ8NI60 647 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TRMT10AQ8TBZ6 339 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SYT17Q9BSW7 474 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TGIF2Q9GZN2 237 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SAP130Q9H0E3 1048 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FXYD6Q9H0Q3 95 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 LMAN2LQ9H0V9 348 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CWH43Q9H720 699 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 DOCK5Q9H7D0 1870 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 HHATLQ9HCP6 504 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ISYNA1Q9NPH2 558 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 COQ3Q9NZJ6 369 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TBC1D24Q9ULP9 559 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CFAP20Q9Y6A4 193 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 DNMT3AQ9Y6K1 912 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 C2orf92A0A1B0GVN3 265 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SLC35F4A4IF30 521 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 FOXE1O00358 373 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 POLR2CP19387 275 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 NDUFV2P19404 249 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ALAS2P22557 587 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CBLP22681 906 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ELAVL4P26378 380 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ACVR2AP27037 513 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 EVI2BP34910 448 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SLC6A12P48065 614 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CAV3P56539 151 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ACTC1P68032 377 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 ACTA1P68133 377 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 MC1RQ01726 317 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 PCDH1Q08174 1060 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SLC14A1Q13336 389 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 LASP1Q14847 261 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CCSAPQ6IQ19 270 aaPredicted RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 SLC25A25Q6KCM7 469 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 Q6ZVU0 165 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 APCDD1Q8J025 514 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 CEP76Q8TAP6 659 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TM9SF4Q92544 642 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 GLYATL1Q969I3 302 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 S100A16Q96FQ6 103 aaKnown RBP6.31□□□□□ -1.4
CPNE3-203ENST00000517490 PRRC1Q96M27 445 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 MCHR1Q99705 422 aa6.31□□□□□ -1.4
CPNE3-203ENST00000517490 TMEM43Q9BTV4 400 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms