RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ADNP2Q6IQ32 1131 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 FAM45BPQ6NSW5 357 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 C8orf74Q6P047 294 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 NUP54Q7Z3B4 507 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 CNTN4Q8IWV2 1026 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 NKAPQ8N5F7 415 aaKnown RBP10.44□□□□□ -0.74
RNF4-216ENST00000511859 CEP112Q8N8E3 955 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 WDSUB1Q8N9V3 476 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 FAM45AQ8TCE6 357 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 DOK4Q8TEW6 326 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 WDR34Q96EX3 536 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 PLPPR2Q96GM1 343 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 LRRC1Q9BTT6 524 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 MS4A8Q9BY19 250 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 SERHLQ9NQF3 203 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 PHF11Q9UIL8 331 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 GOLGA8MH3BSY2 632 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 ADAM11O75078 769 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 PPM1BO75688 479 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 THBS1P07996 1170 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 DANCRP0C864 163 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 SLC35E2BP0CK96 405 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 SLC35E2P0CK97 266 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 SRD5A2P31213 254 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 SSTR4P31391 388 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 GGT5P36269 586 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 BUD31P41223 144 aaPredicted RBP10.43□□□□□ -0.74
RNF4-216ENST00000511859 CASP2P42575 452 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 SSR2P43308 183 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 EEFSECP57772 596 aaKnown RBP10.43□□□□□ -0.74
RNF4-216ENST00000511859 DOC2AQ14183 400 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 FRA10AC1Q70Z53 315 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.43□□□□□ -0.74
RNF4-216ENST00000511859 RDH11Q8TC12 318 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 ZNF473Q8WTR7 871 aaKnown RBP10.43□□□□□ -0.74
RNF4-216ENST00000511859 UBE2E3Q969T4 207 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 SFXN2Q96NB2 322 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 RHNO1Q9BSD3 238 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 OSBPL11Q9BXB4 747 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 SHARPINQ9H0F6 387 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 OR10A5Q9H207 317 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 CNOT10Q9H9A5 744 aaKnown RBP10.43□□□□□ -0.74
RNF4-216ENST00000511859 L2HGDHQ9H9P8 463 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 BARX1Q9HBU1 254 aaPredicted RBP10.43□□□□□ -0.74
RNF4-216ENST00000511859 FANCFQ9NPI8 374 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 RRAGDQ9NQL2 400 aaPredicted RBP10.43□□□□□ -0.74
RNF4-216ENST00000511859 PROCRQ9UNN8 238 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 SNX24Q9Y343 169 aa10.43□□□□□ -0.74
RNF4-216ENST00000511859 MGAM2Q2M2H8 2515 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 C2orf72A6NCS6 295 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 EFCAB8A8MWE9 144 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 SPRY1O43609 319 aaPredicted RBP10.42□□□□□ -0.74
RNF4-216ENST00000511859 GPRIN2O60269 458 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 TTC4O95801 387 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 PEPDP12955 493 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 ZNF37AP17032 561 aaPredicted RBP10.42□□□□□ -0.74
RNF4-216ENST00000511859 PGAM1P18669 254 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 PTGDSP41222 190 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 PGGT1BP53609 377 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 SIRPAP78324 504 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 TNFRSF17Q02223 184 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 TBCCQ15814 346 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 C18orf21Q32NC0 220 aaPredicted RBP10.42□□□□□ -0.74
RNF4-216ENST00000511859 C18orf63Q68DL7 685 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 ADAMTSL2Q86TH1 951 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 PRR22Q8IZ63 422 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 AGGF1Q8N302 714 aaeCLIP10.42□□□□□ -0.74
RNF4-216ENST00000511859 TCAIMQ8N3R3 496 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 ZCCHC7Q8N3Z6 543 aaKnown RBP10.42□□□□□ -0.74
RNF4-216ENST00000511859 MMGT1Q8N4V1 131 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 ZNF615Q8N8J6 731 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 SMAP2Q8WU79 429 aaPredicted RBP10.42□□□□□ -0.74
RNF4-216ENST00000511859 HGDQ93099 445 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 FBXW5Q969U6 566 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 CMTM7Q96FZ5 175 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 TNFRSF13CQ96RJ3 184 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 RHOXF2Q9BQY4 288 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 RNF122Q9H9V4 155 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 CXorf21Q9HAI6 301 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 PRM3Q9NNZ6 103 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 DNAJC11Q9NVH1 559 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 KLRF1Q9NZS2 232 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 HEY2Q9UBP5 337 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 LIPT1Q9Y234 373 aa10.42□□□□□ -0.74
RNF4-216ENST00000511859 ESYT3A0FGR9 886 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 NPEPPSL1A6NEC2 478 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 FAM187AA6NFU0 413 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 DNALI1O14645 258 aaPredicted RBP10.41□□□□□ -0.74
RNF4-216ENST00000511859 PRAMEF4O60810 478 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 TNFRSF21O75509 655 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 AIFM1O95831 613 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 TGFB1P01137 390 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 ALDOAP04075 364 aaKnown RBP10.41□□□□□ -0.74
RNF4-216ENST00000511859 SOD3P08294 240 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 IVDP26440 423 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 SERPINB1P30740 379 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 CDKN1AP38936 164 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 ARFIP1P53367 373 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 CRYMQ14894 314 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 TRADDQ15628 312 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms