RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MAGEA4P43358 317 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 ASMTP46597 345 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 SLC1A6P48664 564 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 HAND2P61296 217 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 ZFP36L1Q07352 338 aaKnown RBP2.52□□□□□ -2.01
CHD1-207ENST00000511628 EMC2Q15006 297 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 HAGHQ16775 308 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 ADPRMQ3LIE5 342 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 ZNF841Q6ZN19 808 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 DPY19L2P2Q6ZN68 376 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 TIPARPQ7Z3E1 657 aaKnown RBP2.52□□□□□ -2.01
CHD1-207ENST00000511628 SLC47A2Q86VL8 602 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 HPS6Q86YV9 775 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 ZNF584Q8IVC4 421 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 PYROXD2Q8N2H3 581 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 ABHD12Q8N2K0 398 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 FBXL16Q8N461 479 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 BCORP1Q8N888 145 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 MLKLQ8NB16 471 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 ICA1LQ8NDH6 482 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 ANKRD20A12PQ8NF67 263 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 OR4Q3Q8NH05 313 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 FBXO25Q8TCJ0 367 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 SELENOMQ8WWX9 145 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 FCGR1BQ92637 280 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 TAF4BQ92750 862 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 BIRC7Q96CA5 298 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 CPXM1Q96SM3 734 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 CHCHD5Q9BSY4 110 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 NDUFAF3Q9BU61 184 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 APOOQ9BUR5 198 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 PNNQ9H307 717 aaKnown RBP2.52□□□□□ -2.01
CHD1-207ENST00000511628 FAM124BQ9H5Z6 455 aaPredicted RBP2.52□□□□□ -2.01
CHD1-207ENST00000511628 ECT2Q9H8V3 914 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 GNB4Q9HAV0 340 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 GTSE1Q9NYZ3 720 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 P2RX2Q9UBL9 471 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 EIF3KQ9UBQ5 218 aaKnown RBP2.52□□□□□ -2.01
CHD1-207ENST00000511628 SPATA2Q9UM82 520 aa2.52□□□□□ -2.01
CHD1-207ENST00000511628 AFF2P51816 1311 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 IGHV3-16A0A0C4DH30 117 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 SHISA9B4DS77 424 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 H0YL77 283 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 IMPA2O14732 288 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 HPP00738 406 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 NCF1P14598 390 aaPredicted RBP2.51□□□□□ -2.01
CHD1-207ENST00000511628 ARF4P18085 180 aaPredicted RBP2.51□□□□□ -2.01
CHD1-207ENST00000511628 LMO2P25791 158 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 CCND2P30279 289 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 HPDP32754 393 aaPredicted RBP2.51□□□□□ -2.01
CHD1-207ENST00000511628 SAA4P35542 130 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 MATKP42679 507 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 SLC1A4P43007 532 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 POU3F4P49335 361 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 CDKL1Q00532 357 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 ZNF85Q03923 595 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 NME3Q13232 169 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 DPYSQ14117 519 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 INAQ16352 499 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 PCK2Q16822 640 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 C15orf32Q32M92 178 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 ACSF3Q4G176 576 aaPredicted RBP2.51□□□□□ -2.01
CHD1-207ENST00000511628 C9orf66Q5T8R8 295 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 SEL1L2Q5TEA6 688 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 PNCKQ6P2M8 343 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 RFWD3Q6PCD5 774 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 ATRAIDQ6UW56 229 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 OLFM4Q6UX06 510 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 MOB2Q70IA6 237 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 LUZP1Q86V48 1076 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 RNF130Q86XS8 419 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 SAMD12Q8N8I0 201 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 C17orf47Q8NEP4 570 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 WDR36Q8NI36 951 aaKnown RBP2.51□□□□□ -2.01
CHD1-207ENST00000511628 NCLNQ969V3 563 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 ANKRD27Q96NW4 1050 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 HSD17B14Q9BPX1 270 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 NACA2Q9H009 215 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 ADNPQ9H2P0 1102 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 TUBB1Q9H4B7 451 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 PRR34Q9NV39 138 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 RCOR3Q9P2K3 495 aaPredicted RBP2.51□□□□□ -2.01
CHD1-207ENST00000511628 MBD2Q9UBB5 411 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 TUBGCP4Q9UGJ1 667 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 EMCNQ9ULC0 261 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 AURKCQ9UQB9 309 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 STYXL1Q9Y6J8 313 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 SYNJ2O15056 1496 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 NCAPD2Q15021 1401 aa2.51□□□□□ -2.01
CHD1-207ENST00000511628 PARD3Q8TEW0 1356 aa2.5□□□□□ -2.01
CHD1-207ENST00000511628 TRIM49BA6NDI0 452 aa2.5□□□□□ -2.01
CHD1-207ENST00000511628 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.5□□□□□ -2.01
CHD1-207ENST00000511628 LGALS8O00214 317 aa2.5□□□□□ -2.01
CHD1-207ENST00000511628 PDXKO00764 312 aa2.5□□□□□ -2.01
CHD1-207ENST00000511628 CYB561D2O14569 222 aa2.5□□□□□ -2.01
CHD1-207ENST00000511628 BUB1O43683 1085 aa2.5□□□□□ -2.01
CHD1-207ENST00000511628 SDC3O75056 442 aa2.5□□□□□ -2.01
CHD1-207ENST00000511628 SCGB2A1O75556 95 aa2.5□□□□□ -2.01
CHD1-207ENST00000511628 TOXO94900 526 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms