RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TSPAN18Q96SJ8 248 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 C19orf43Q9BQ61 176 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ST6GALNAC5Q9BVH7 336 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ALG9Q9H6U8 611 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ESM1Q9NQ30 184 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 CUTCQ9NTM9 273 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 CNOT2Q9NZN8 540 aaKnown RBP2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ARMCX1Q9P291 453 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 IL20RAQ9UHF4 553 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 RNF24Q9Y225 148 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 PIN4Q9Y237 131 aaKnown RBP2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 CSAG2Q9Y5P2 127 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 SYNJ2O15056 1496 aa2.7□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZMYM6O95789 1325 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 PTPRUQ92729 1446 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 NPIPA5A0A0B4J1W7 369 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 SRRM5B3KS81 715 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 NPIPA5E9PKD4 350 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 H3BMH7 237 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 ADAM12O43184 909 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 ECDO95905 644 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 MELTFP08582 738 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 FOLR2P14207 255 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 ARF4P18085 180 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 GATA2P23769 480 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 MAT2AP31153 395 aaKnown RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 ELK3P41970 407 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 RPL34P49207 117 aaKnown RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 TAF6P49848 677 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 SGSHP51688 502 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 IST1P53990 364 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 HMGCS2P54868 508 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 VCPP55072 806 aaKnown RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 SRYQ05066 204 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 GABPB1Q06547 395 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 SNX1Q13596 522 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 PARP6Q2NL67 630 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF528Q3MIS6 628 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 SLC22A6Q4U2R8 563 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 BEND6Q5SZJ8 279 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 SEL1L2Q5TEA6 688 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 TAF3Q5VWG9 929 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 RAET1GQ6H3X3 334 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 GOLGA7Q7Z5G4 137 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 CEACAM19Q7Z692 300 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 P2RY8Q86VZ1 359 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 SLC22A18ASQ8N1D0 253 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 MRPL43Q8N983 215 aaKnown RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF397Q8NF99 534 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 OR56B1Q8NGI3 324 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 OR6T1Q8NGN1 323 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 RHOXF1Q8NHV9 184 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 WDR36Q8NI36 951 aaKnown RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 TBCKQ8TEA7 893 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 WBP1Q96G27 269 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 FAM173AQ9BQD7 235 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 NDUFAF3Q9BU61 184 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 NGBQ9NPG2 151 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF446Q9NWS9 450 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 SOHLH2Q9NX45 425 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 GDAP2Q9NXN4 497 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 DHRS4-AS1Q9P1J3 65 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZNF490Q9ULM2 529 aaPredicted RBP2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 FZR1Q9UM11 496 aa2.69□□□□□ -1.98
TRAPPC11-207ENST00000511409 UBE4BO95155 1302 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 TRAV9-2A0A087WT02 112 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 MFSD2BA6NFX1 497 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 C11orf98E9PRG8 122 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 LGALS8O00214 317 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 GPRIN2O60269 458 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 SDC3O75056 442 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 STK17BO94768 372 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 IGSF6O95976 241 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 IGHG3P01860 377 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 SNRPCP09234 159 aaKnown RBP2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 FAM200BP0CF97 657 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 GP9P14770 177 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 TSPAN8P19075 237 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 CCNA2P20248 432 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 RPA1P27694 616 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 CHRNA3P32297 505 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 RFC2P35250 354 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 PTGER3P43115 390 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 ASMTP46597 345 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 CAMLGP49069 296 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 HAND2P61296 217 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 HERVK_113P63132 956 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 ERVK-8P63133 956 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 EIF2B1Q14232 305 aaKnown RBP2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 SLC10A1Q14973 349 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 CD226Q15762 336 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 ADAMTSL5Q6ZMM2 481 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 STOX1Q6ZVD7 989 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 PRSS48Q7RTY5 328 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 ZSCAN30Q86W11 494 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 RNF148Q8N7C7 305 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 AGAP11Q8TF27 550 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 CRYGNQ8WXF5 182 aa2.68□□□□□ -1.98
TRAPPC11-207ENST00000511409 NTNG2Q96CW9 530 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms