RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SNAP47Q5SQN1 464 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 BHLHB9Q6PI77 547 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 APH1BQ8WW43 257 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 SLC35A4Q96G79 324 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 VCX3AQ9NNX9 186 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 GIN1Q9NXP7 522 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 PTTG2Q9NZH5 202 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 GPC6Q9Y625 555 aaPredicted RBP13.96□□□□□ -0.17
PHF3-209ENST00000509330 CENPVL1A0A0U1RR11 272 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 A0A1W2PPW3 197 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 TRIM64CA6NLI5 447 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 OR5K4A6NMS3 321 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 CHURC1-FNTBB4DL54 471 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 TLR4O00206 839 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 WBP4O75554 376 aaKnown RBP13.96□□□□□ -0.17
PHF3-209ENST00000509330 MED26O95402 600 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 ZIC2O95409 532 aaPredicted RBP13.96□□□□□ -0.17
PHF3-209ENST00000509330 CD27P26842 260 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 MVKQ03426 396 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 ZNF311Q5JNZ3 666 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 COLEC12Q5KU26 742 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 ZNF605Q86T29 641 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 P3H2Q8IVL5 708 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 CCDC103Q8IW40 242 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 NCSTNQ92542 709 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 PIK3R3Q92569 461 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 MSANTD3Q96H12 275 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 SOHLH2Q9NX45 425 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 HCN4Q9Y3Q4 1203 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 SLC22A7Q9Y694 548 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 CPSF4LA6NMK7 179 aaKnown RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 H3BN98 237 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 CSF2P04141 144 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 SMIM10L1P0DMW3 83 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 CPMP14384 443 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 TSFMP43897 325 aaKnown RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 LSM3P62310 102 aaKnown RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 LSAMPQ13449 338 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 GPR68Q15743 365 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 SLC30A8Q8IWU4 369 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 SLC7A13Q8TCU3 470 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 GIMAP5Q96F15 307 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 SMIM10Q96HG1 83 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 ARMC7Q9H6L4 198 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 PHF11Q9UIL8 331 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 TMCC3Q9ULS5 477 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 ENTPD2Q9Y5L3 495 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 C10orf142B7Z368 130 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 UGT2B17O75795 530 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 MT-ND2P03891 347 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 H1F0P07305 194 aaKnown RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 CT62P0C5K7 136 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 ELAVL4P26378 380 aaKnown RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 CTSKP43235 329 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 HPCAP84074 193 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 KCNAB1Q14722 419 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 DCST1Q5T197 706 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 TMEM64Q6YI46 380 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 C19orf47Q8N9M1 422 aaKnown RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 ZNF764Q96H86 408 aaPredicted RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 YTHDF1Q9BYJ9 559 aaKnown RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 SLC38A1Q9H2H9 487 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 TBC1D17Q9HA65 648 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 GPR27Q9NS67 375 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 POMT2Q9UKY4 750 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 MRPS17Q9Y2R5 130 aaKnown RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 H3BMQ9 156 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 ANXA8P13928 327 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 RXRGP48443 463 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 SEPHS1P49903 392 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 EMX1Q04741 257 aaPredicted RBP13.95□□□□□ -0.18
PHF3-209ENST00000509330 TARDBPQ13148 414 aaKnown RBP eCLIP13.95□□□□□ -0.18
PHF3-209ENST00000509330 ELOCQ15369 112 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 DUSP5Q16690 384 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 AMZ1Q400G9 498 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 DGAT2L6Q6ZPD8 337 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 PEX11GQ96HA9 241 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 COG8Q96MW5 612 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 IL4I1Q96RQ9 567 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 FBXO34Q9NWN3 711 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 ZSCAN32Q9NX65 697 aa13.95□□□□□ -0.18
PHF3-209ENST00000509330 SYNDIG1LA6NDD5 238 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 PRKNO60260 465 aaPredicted RBP13.94□□□□□ -0.18
PHF3-209ENST00000509330 C21orf33P30042 268 aaPredicted RBP13.94□□□□□ -0.18
PHF3-209ENST00000509330 SOX18P35713 384 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 ELOAQ14241 798 aaKnown RBP13.94□□□□□ -0.18
PHF3-209ENST00000509330 PTGES3Q15185 160 aaKnown RBP13.94□□□□□ -0.18
PHF3-209ENST00000509330 BORAQ6PGQ7 559 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 FIGNL1Q6PIW4 674 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 RNF44Q7L0R7 432 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 CLIP4Q8N3C7 705 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 IQCF1Q8N6M8 205 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 RNF217Q8TC41 542 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 ADAMTS16Q8TE57 1224 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 HRASLS5Q96KN8 279 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 IMPAD1Q9NX62 359 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 POFUT2Q9Y2G5 429 aa13.94□□□□□ -0.18
PHF3-209ENST00000509330 SEC16AO15027 2179 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms