RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 OR5K4A6NMS3 321 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 POM121CA8CG34 1229 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 RGS10O43665 173 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ERAL1O75616 437 aaKnown RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 TPPPO94811 219 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ETHE1O95571 254 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 CER1O95813 267 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 RPLP0P05388 317 aaKnown RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 C8BP07358 591 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 G6PDP11413 515 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ID2Q02363 134 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 PRDX1Q06830 199 aaKnown RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 FGFBP1Q14512 234 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 DEFB134Q4QY38 66 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 SLCO4C1Q6ZQN7 724 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 EID3Q8N140 333 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 GRPEL2Q8TAA5 225 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 IER2Q9BTL4 223 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 ACPTQ9BZG2 426 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 TRIM45Q9H8W5 580 aaPredicted RBP8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 POT1Q9NUX5 634 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 USE1Q9NZ43 259 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 TMEM131Q92545 1883 aa8.2□□□□□ -1.1
LIMCH1-209ENST00000509277 LOC105369274A0A096LPK9 316 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 CCDC163A0A0D9SF12 145 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 LOC102723532A0A0G2JNH3 316 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 SLC22A1O15245 554 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 GALR2O43603 387 aaPredicted RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 CPSF4O95639 269 aaKnown RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 CTSBP07858 339 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 PEBP1P30086 187 aaKnown RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 ATP6AP1Q15904 470 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 TOR1AIP1Q5JTV8 583 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 PAGE3Q5JUK9 113 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 C1orf189Q5VU69 101 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 PLET1Q6UQ28 207 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 IQCHQ86VS3 1027 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 ADGRF3Q8IZF5 1079 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 OR4N4Q8N0Y3 316 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 TBC1D19Q8N5T2 526 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 KRTCAP2Q8N6L1 136 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 CHDHQ8NE62 594 aaPredicted RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 OR2L8Q8NGY9 312 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 OR8K5Q8NH50 307 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 DNAJB8Q8NHS0 232 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 SLC6A20Q9NP91 592 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 AKIP1Q9NQ31 210 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 KCNN3Q9UGI6 736 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 C3orf18Q9UK00 162 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 TPRKBQ9Y3C4 175 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 MDC1Q14676 2089 aaKnown RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 RP1L1Q8IWN7 2480 aaPredicted RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 ARPC4-TTLL3A0A0A6YYG9 625 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 MEIOCA2RUB1 952 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 SLCO1B7G3V0H7 640 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 PRKRAO75569 313 aaKnown RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 SEC14L2O76054 403 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 ANXA4P09525 319 aaPredicted RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 TSPAN19P0C672 248 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 JUPP14923 745 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 SLC6A2P23975 617 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 IGFBP5P24593 272 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 RRM2P31350 389 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 SOX6P35712 828 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 LSSP48449 732 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 C2orf80Q0P641 193 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 FRMPD2BQ6IN97 320 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 NOXA1Q86UR1 476 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 RAB11FIP5Q9BXF6 653 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 DPY30Q9C005 99 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 PCED1AQ9H1Q7 454 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 FAM118AQ9NWS6 357 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 NKIRAS2Q9NYR9 191 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 OR6C2Q9NZP2 312 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 PCDHGB6Q9Y5F9 930 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 PCDHGA2Q9Y5H1 932 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 A0A1B0GTQ1 180 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 SYNDIG1LA6NDD5 238 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 WASHC1A8K0Z3 465 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 KCNJ13O60928 360 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 ERN1O75460 977 aaKnown RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 CAPNS1P04632 268 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 HOXC4P09017 264 aaPredicted RBP8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 TACR1P25103 407 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 BCL6P41182 706 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 CSNK1G2P78368 415 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 BTN3A2P78410 334 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 SNAPC1Q16533 368 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 CTF1Q16619 201 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 TIGD6Q17RP2 521 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 AKIRIN2Q53H80 203 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 C6orf136Q5SQH8 315 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 C6orf132Q5T0Z8 1188 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 KANK2Q63ZY3 851 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 WASH2PQ6VEQ5 465 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 FAM9CQ8IZT9 166 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 WDR48Q8TAF3 677 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 TXNDC15Q96J42 360 aa8.19□□□□□ -1.1
LIMCH1-209ENST00000509277 MAGEB10Q96LZ2 347 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms