RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 HSPB2A8KAH6 182 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 DLX3O60479 287 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 TRAPPC6AO75865 159 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 SUPT7LO94864 414 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 KRT6AP02538 564 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 KRT6BP04259 564 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 HSD3B1P14060 373 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 CHN1P15882 459 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 PCSK2P16519 638 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 NAGAP17050 411 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 HSD3B2P26439 372 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 PTPN6P29350 595 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 CEACAM8P31997 349 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 DEKP35659 375 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 PTGDSP41222 190 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 KRT6CP48668 564 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 ALDH9A1P49189 494 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 EMDP50402 254 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 HTR6P50406 440 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 TRA2BP62995 288 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 RPP38P78345 283 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 RAE1P78406 368 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 MRPS35P82673 323 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 PLCXD2Q0VAA5 305 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 CSTF3Q12996 717 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 HSPB2Q16082 182 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 EIPR1Q53HC9 387 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 NHSL2Q5HYW2 709 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 TIGD3Q6B0B8 471 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 VASNQ6EMK4 673 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 LCA5Q86VQ0 697 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 LACC1Q8IV20 430 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 TNIP2Q8NFZ5 429 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 OR52R1Q8NGF1 315 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 MTBPQ96DY7 904 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 OMA1Q96E52 524 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 LCORQ96JN0 433 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 SH3GL2Q99962 352 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 FAIM2Q9BWQ8 316 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 ACPTQ9BZG2 426 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 METTL7AQ9H8H3 244 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 GALNT9Q9HCQ5 603 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 NMRK1Q9NWW6 199 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 EHD3Q9NZN3 535 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 BCAP29Q9UHQ4 241 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 MCM8Q9UJA3 840 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 UTS2RQ9UKP6 389 aa11.88□□□□□ -0.51
HMGCS1-205ENST00000508319 AHRRA9YTQ3 701 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 GNB5O14775 395 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 SNPHO15079 494 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 ACOX3O15254 700 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 RIPK2O43353 540 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 UGT2B11O75310 529 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 EPPINO95925 133 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 IL3P08700 152 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 BMP7P18075 431 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 KRT15P19012 456 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 TAC1P20366 129 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 BMP5P22003 454 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 ATP5F1P24539 256 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 TIMP3P35625 211 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 SNTB1Q13884 538 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 TRMT12Q53H54 448 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 ZNF628Q5EBL2 1059 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 TEX35Q5T0J7 233 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 LGSNQ5TDP6 509 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 CES4AQ5XG92 561 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 POMZP3Q6PJE2 187 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 ARSKQ6UWY0 536 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 GPRIN3Q6ZVF9 776 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 NUP54Q7Z3B4 507 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 ZZZ3Q8IYH5 903 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 PM20D2Q8IYS1 436 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 OR1J4Q8NGS1 313 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 ZNF675Q8TD23 568 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 NRGNQ92686 78 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 HSPBAP1Q96EW2 488 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 C11orf24Q96F05 449 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 NODALQ96S42 347 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 OSBPL11Q9BXB4 747 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 UGT2B28Q9BY64 529 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 PSME2Q9UL46 239 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 ZNF780BQ9Y6R6 833 aa11.87□□□□□ -0.51
HMGCS1-205ENST00000508319 ABCA4P78363 2273 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 FRG2CA6NGY1 282 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 TO15178 435 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 PCDH7O60245 1069 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 CDH16O75309 829 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 CTAG2O75638 210 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 ZWINTO95229 277 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 RHOXF2BP0C7M4 288 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 IMPDH1P20839 514 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 PPICP45877 212 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 ASCL1P50553 236 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 ZNF136P52737 540 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 PRKAA2P54646 552 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 NAGLUP54802 743 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 DCAF7P61962 342 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 HMGCS1Q01581 520 aa11.86□□□□□ -0.51
HMGCS1-205ENST00000508319 LCP2Q13094 533 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms