RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MAN2A2P49641 1150 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRLHRP49683 370 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 KHKP50053 298 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ETV1P50549 477 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 MAPK12P53778 367 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 MANFP55145 182 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 RAG2P55895 527 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 RPS25P62851 125 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRA2BP62995 288 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 GPLD1P80108 840 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZXDBP98169 803 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 PITPNAQ00169 270 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CDK5Q00535 292 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TAGLNQ01995 201 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TAP2Q03519 686 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 HSF2Q03933 536 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 BAMBIQ13145 260 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZXDCQ2QGD7 858 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF385BQ569K4 471 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 RTP2Q5QGT7 225 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZBTB37Q5TC79 503 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM164Q5U3C3 297 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 C9orf131Q5VYM1 1079 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CD276Q5ZPR3 534 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF57Q68EA5 555 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TYW3Q6IPR3 259 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC27A4Q6P1M0 643 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 C1orf94Q6P1W5 598 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 NXPE4Q6UWF7 544 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 C17orf99Q6UX52 265 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 GDPD4Q6W3E5 623 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF852Q6ZMS4 543 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 RFPL4BQ6ZWI9 263 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 HTR3DQ70Z44 454 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 RRM2BQ7LG56 351 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 MRGPREQ86SM8 312 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMPRSS11BQ86T26 416 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 RNF180Q86T96 592 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 RTN4RL1Q86UN2 441 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 PDZD3Q86UT5 571 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TPRA1Q86W33 373 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 LRRC28Q86X40 367 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 KIF18BQ86Y91 864 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 NPAS4Q8IUM7 802 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 VRK3Q8IV63 474 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 NRSN1Q8IZ57 195 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 APCDD1Q8J025 514 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TOR1AIP2Q8NFQ8 470 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 NLGN2Q8NFZ4 835 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR4K1Q8NGD4 311 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR8H1Q8NGG4 311 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR6K2Q8NGY2 324 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 NEIL3Q8TAT5 605 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF417Q8TAU3 575 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 PIGXQ8TBF5 258 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 LRRC20Q8TCA0 184 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF431Q8TF32 576 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC38A5Q8WUX1 472 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 APOBEC4Q8WW27 367 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC5A11Q8WWX8 675 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 OSTF1Q92882 214 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 COL26A1Q96A83 441 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 RFT1Q96AA3 541 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CIDECQ96AQ7 238 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 MOAP1Q96BY2 351 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF514Q96K75 400 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR2M2Q96R28 347 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 UBL7Q96S82 380 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF587Q96SQ5 575 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 KCNJ15Q99712 375 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ATF6BQ99941 703 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 JAM3Q9BX67 310 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 SGPP1Q9BX95 441 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 PITHD1Q9GZP4 211 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 PCBD2Q9H0N5 130 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 HDHD2Q9H0R4 259 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 DPAGT1Q9H3H5 408 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 PELI2Q9HAT8 420 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 C12orf10Q9HB07 376 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CACYBPQ9HB71 228 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF275Q9NSD4 429 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 ACSS1Q9NUB1 689 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 GPATCH2Q9NW75 528 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 MARCH5Q9NX47 278 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 GLTPQ9NZD2 209 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CALML5Q9NZT1 146 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 H2AFY2Q9P0M6 372 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 NLKQ9UBE8 527 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 COMMD3Q9UBI1 195 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 B4GALT6Q9UBX8 382 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TESQ9UGI8 421 aaKnown RBP4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC13A4Q9UKG4 626 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMPRSS11EQ9UL52 423 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CBLCQ9ULV8 474 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CLCA2Q9UQC9 943 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 LIPT1Q9Y234 373 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 HS3ST2Q9Y278 367 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 SPEF1Q9Y4P9 236 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 YIPF1Q9Y548 306 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms