RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 SMAD7O15105 426 aaKnown RBP12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 CTIFO43310 598 aaKnown RBP12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 UGT2B11O75310 529 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 CBR3O75828 277 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 CPMP14384 443 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 PORP16435 677 aaPredicted RBP12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 PIK3CGP48736 1102 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 STARP49675 285 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 LHX2P50458 406 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 XKP51811 444 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 GPX6P59796 221 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 GAB1Q13480 694 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 PFKFB4Q16877 469 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 PRICKLE4Q2TBC4 344 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 KBTBD12Q3ZCT8 623 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 GRTP1Q5TC63 336 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 PRSS57Q6UWY2 283 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 C3orf62Q6ZUJ4 267 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 NUP54Q7Z3B4 507 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 GOLGA7Q7Z5G4 137 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 YTHDF3Q7Z739 585 aaKnown RBP12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 IFNEQ86WN2 208 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 CTAGE3PQ8IX95 158 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 WDSUB1Q8N9V3 476 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 L3MBTL4Q8NA19 623 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 SIMC1Q8NDZ2 872 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 RHEBL1Q8TAI7 183 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 KCTD4Q8WVF5 259 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 PIGTQ969N2 578 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 BDH2Q9BUT1 245 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 IPPKQ9H8X2 491 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 EHD3Q9NZN3 535 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 KLRF1Q9NZS2 232 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 RNF11Q9Y3C5 154 aa12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 FN1P02751 2386 aaKnown RBP12.56□□□□□ -0.4
TSPAN17-206ENST00000507471 NSD1Q96L73 2696 aaPredicted RBP12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 A0A1W2PNV4 684 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 SYCE1LA8MT33 242 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 DEFB108AA8MXU0 73 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 CCDC188H7C350 402 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 PLOD2O00469 737 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 SEMA3DO95025 777 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 GFAPP14136 432 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 CHMP24386 653 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 CNTFP26441 200 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 CRABP2P29373 138 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 EEF1A1P68104 462 aaKnown RBP12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 IRF9Q00978 393 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 FAM27E3Q08E93 113 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 PLCXD2Q0VAA5 305 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 MGAT2Q10469 447 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 GTF2H2Q13888 395 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 EXOSC7Q15024 291 aaKnown RBP12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 ACKR1Q16570 336 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 EEF1A1P5Q5VTE0 462 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 GTF2H2CQ6P1K8 395 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 FAM111BQ6SJ93 734 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 SCIMPQ6UWF3 145 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 GRAMD2AQ8IUY3 354 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 CENPLQ8N0S6 344 aaPredicted RBP12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 PIK3IP1Q96FE7 263 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 LCORQ96JN0 433 aaPredicted RBP12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 WFIKKN1Q96NZ8 548 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 SERPINI1Q99574 410 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 CCL19Q99731 98 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 BRINP2Q9C0B6 783 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 KLHL28Q9NXS3 571 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 TAS2R10Q9NYW0 307 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 MAT2BQ9NZL9 334 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 BCAP29Q9UHQ4 241 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 ZNF639Q9UID6 485 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 PLLPQ9Y342 182 aa12.55□□□□□ -0.4
TSPAN17-206ENST00000507471 FBN3Q75N90 2809 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 TRIM64A6NGJ6 449 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 PRAMEF25A6NGN4 478 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 TRIM64BA6NI03 449 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 INAFM1C9JVW0 142 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 MSTNO14793 375 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 ACOX3O15254 700 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 ZSCAN12O43309 604 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 HCRTR2O43614 444 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 SMNDC1O75940 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 SIX3O95343 332 aaPredicted RBP12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 TGM6O95932 706 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 ATP1B1P05026 303 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 KLK1P06870 262 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 ZNF708P17019 499 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 MC3RP41968 323 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 ALDH18A1P54886 795 aaKnown RBP12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 CLDN18P56856 261 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 MRPS25P82663 173 aaKnown RBP12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 MAP4K2Q12851 820 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 SLC48A1Q6P1K1 146 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 VWA1Q6PCB0 445 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 LRRN4CLQ8ND94 238 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 PERPQ96FX8 193 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 CDK15Q96Q40 435 aa12.54□□□□□ -0.4
TSPAN17-206ENST00000507471 MRPL1Q9BYD6 325 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms