RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 PRSS53Q2L4Q9 553 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 KRT71Q3SY84 523 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 NOXRED1Q6NXP6 359 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 XKRXQ6PP77 449 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 TRILQ7L0X0 811 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 TICAM1Q8IUC6 712 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 FAM9CQ8IZT9 166 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.89■□□□□ 0.29
HOXD11-202ENST00000498438 PHF10Q8WUB8 498 aaKnown RBP16.89■□□□□ 0.29
HOXD11-202ENST00000498438 ERP27Q96DN0 273 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 LCORQ96JN0 433 aaPredicted RBP16.89■□□□□ 0.29
HOXD11-202ENST00000498438 ZNF597Q96LX8 424 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 BBS4Q96RK4 519 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 MIEF1Q9NQG6 463 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 HRH3Q9Y5N1 445 aa16.89■□□□□ 0.29
HOXD11-202ENST00000498438 KLF2Q9Y5W3 355 aaPredicted RBP16.89■□□□□ 0.29
HOXD11-202ENST00000498438 FREM3P0C091 2139 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 ANKRD33BA6NCL7 494 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 TMEM233B4DJY2 109 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 NPIPB8E9PQR5 432 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 SLC28A1O00337 649 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 ACOX3O15254 700 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 RGS14O43566 566 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 TRIM3O75382 744 aaPredicted RBP16.88■□□□□ 0.29
HOXD11-202ENST00000498438 SEC22BO75396 215 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 PPM1BO75688 479 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 CHEK2O96017 543 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 AGAP20933 346 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 PRPH2P23942 346 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 GRNP28799 593 aaKnown RBP16.88■□□□□ 0.29
HOXD11-202ENST00000498438 DCAF7P61962 342 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 ZNF844Q08AG5 666 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 PLCXD2Q0VAA5 305 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 SLC10A1Q14973 349 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 EMC4Q5J8M3 183 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 TBCELQ5QJ74 424 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 RNF165Q6ZSG1 346 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 ZCCHC23Q6ZST2 131 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 IKBIPQ70UQ0 350 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 OR2T11Q8NH01 316 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 HSPBAP1Q96EW2 488 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 METTL2AQ96IZ6 378 aaKnown RBP16.88■□□□□ 0.29
HOXD11-202ENST00000498438 RILPQ96NA2 401 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 SECISBP2Q96T21 854 aaKnown RBP16.88■□□□□ 0.29
HOXD11-202ENST00000498438 TP63Q9H3D4 680 aaPredicted RBP16.88■□□□□ 0.29
HOXD11-202ENST00000498438 TUBB1Q9H4B7 451 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 LRTM1Q9HBL6 345 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 C1orf109Q9NX04 203 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 SENP1Q9P0U3 644 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 TNFRSF10DQ9UBN6 386 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 RAB21Q9UL25 225 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 DNAJC15Q9Y5T4 150 aa16.88■□□□□ 0.29
HOXD11-202ENST00000498438 A0A1B0GVC2 190 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 OR14I1A6ND48 311 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 FRG2CA6NGY1 282 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 MYO1GB0I1T2 1018 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 AQP7O14520 342 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 TYROBPO43914 113 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 NME6O75414 186 aaPredicted RBP16.87■□□□□ 0.29
HOXD11-202ENST00000498438 BCAS2O75934 225 aaPredicted RBP16.87■□□□□ 0.29
HOXD11-202ENST00000498438 ABCB1P08183 1280 aaPredicted RBP16.87■□□□□ 0.29
HOXD11-202ENST00000498438 LINC00032P0C843 101 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 NEFHP12036 1026 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 TACR1P25103 407 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 MPIP34949 423 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 PPICP45877 212 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 MAN2A2P49641 1150 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 NCBP2P52298 156 aaKnown RBP eCLIP16.87■□□□□ 0.29
HOXD11-202ENST00000498438 RPP38P78345 283 aaKnown RBP16.87■□□□□ 0.29
HOXD11-202ENST00000498438 KIAA0040Q15053 153 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 CDSNQ15517 529 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 ARL13AQ5H913 290 aaPredicted RBP16.87■□□□□ 0.29
HOXD11-202ENST00000498438 TMEM198Q66K66 360 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 Q6ZSR9 355 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 MARVELD2Q8N4S9 558 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 OR7G2Q8NG99 324 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 OR5M9Q8NGP3 310 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 OMA1Q96E52 524 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 LDAHQ9H6V9 325 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 PNPLA3Q9NST1 481 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 B4GALT7Q9UBV7 327 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 EXO1Q9UQ84 846 aaKnown RBP16.87■□□□□ 0.29
HOXD11-202ENST00000498438 WBP11Q9Y2W2 641 aaKnown RBP16.87■□□□□ 0.29
HOXD11-202ENST00000498438 TEX15Q9BXT5 2789 aa16.87■□□□□ 0.29
HOXD11-202ENST00000498438 PHF3Q92576 2039 aaKnown RBP16.86■□□□□ 0.29
HOXD11-202ENST00000498438 TRGV5A0A0B4J1U4 118 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 BCKDKO14874 412 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 SUSD5O60279 629 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 PLOD3O60568 738 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 HCN1O60741 890 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 JUNP05412 331 aaKnown RBP16.86■□□□□ 0.29
HOXD11-202ENST00000498438 NAGAP17050 411 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 DRD5P21918 477 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 GDF1P27539 372 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 HTR1EP28566 365 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 NTSP30990 170 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 CASP3P42574 277 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 RPL38P63173 70 aaKnown RBP16.86■□□□□ 0.29
HOXD11-202ENST00000498438 GXYLT1Q4G148 440 aa16.86■□□□□ 0.29
HOXD11-202ENST00000498438 SP5Q6BEB4 398 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms