RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 OR9I1Q8NGQ6 314 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 ASB15Q8WXK1 588 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 LCORQ96JN0 433 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 MS4A4EQ96PG1 132 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 ELAC2Q9BQ52 826 aaKnown RBP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 LIN28AQ9H9Z2 209 aaKnown RBP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 ZBTB20Q9HC78 741 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 ZCCHC3Q9NUD5 404 aaKnown RBP15.84■□□□□ 0.13
HDAC6-235ENST00000495515 NTMQ9P121 344 aa15.84■□□□□ 0.13
HDAC6-235ENST00000495515 ATRXP46100 2492 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 CAPN14A8MX76 684 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 C9JVG2 144 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 K7EM74 188 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 ACOX3O15254 700 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 MAN1A2O60476 641 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 SCN2BO60939 215 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 ERN1O75460 977 aaKnown RBP15.83■□□□□ 0.12
HDAC6-235ENST00000495515 CPSF4O95639 269 aaKnown RBP15.83■□□□□ 0.12
HDAC6-235ENST00000495515 DRD4P21917 467 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 DRD5P21918 477 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 SOAT1P35610 550 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 CCT3P49368 545 aaKnown RBP15.83■□□□□ 0.12
HDAC6-235ENST00000495515 PRIM2P49643 509 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 HLCSP50747 726 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 NR0B1P51843 470 aaKnown RBP15.83■□□□□ 0.12
HDAC6-235ENST00000495515 PRKAG1P54619 331 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 HBA1P69905 142 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 PHC1P78364 1004 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 DUSP8Q13202 625 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 TLR1Q15399 786 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 VPS26BQ4G0F5 336 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 AGKQ53H12 422 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 ZCCHC12Q6PEW1 402 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 ANKRD46Q86W74 232 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 CLECL1Q8IZS7 167 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 CPSF7Q8N684 471 aaKnown RBP15.83■□□□□ 0.12
HDAC6-235ENST00000495515 ZNF441Q8N8Z8 693 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 SFXN5Q8TD22 340 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 C10orf82Q8WW14 230 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 SLC39A7Q92504 469 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 ADIPOR1Q96A54 375 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 FAM120BQ96EK7 910 aaKnown RBP15.83■□□□□ 0.12
HDAC6-235ENST00000495515 HSPBAP1Q96EW2 488 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 CCDC115Q96NT0 180 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 PANX1Q96RD7 426 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 RASL10BQ96S79 203 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 ITPAQ9BY32 194 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 ANKRA2Q9H9E1 313 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 FOLH1BQ9HBA9 442 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 SIRT3Q9NTG7 399 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-235ENST00000495515 PLA2G3Q9NZ20 509 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 CCDC167Q9P0B6 97 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 ERVK-11Q9UQG0 969 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 NBEAQ8NFP9 2946 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 MGAQ8IWI9 3026 aa15.83■□□□□ 0.12
HDAC6-235ENST00000495515 TRAV17A0A0B4J275 112 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 FRG2CA6NGY1 282 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 CCDC154A6NI56 674 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 A8MVJ9 347 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 CCDC22O60826 627 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 SOX30O94993 753 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 PSMG1O95456 288 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 KRT16P08779 473 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 CD96P40200 585 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 TMED10P49755 219 aaKnown RBP15.82■□□□□ 0.12
HDAC6-235ENST00000495515 KLRB1Q12918 225 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 TUBA3CQ13748 450 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 RCAN2Q14206 197 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 MAPKAPK3Q16644 382 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 TIGD2Q4W5G0 525 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 TUBA3EQ6PEY2 450 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 BLOC1S3Q6QNY0 202 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 C16orf47Q6ZP98 133 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-235ENST00000495515 CDRT4Q8N9R6 151 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 SIMC1Q8NDZ2 872 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 TMEM125Q96AQ2 219 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 ITCHQ96J02 903 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 VSTM2LQ96N03 204 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 BBC3Q96PG8 261 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-235ENST00000495515 BTBD9Q96Q07 612 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 EPN3Q9H201 632 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 ZNF385DQ9H6B1 395 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 CXorf36Q9H7Y0 433 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 TRIM45Q9H8W5 580 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-235ENST00000495515 HPF1Q9NWY4 346 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 LRFN1Q9P244 771 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 B3GNT3Q9Y2A9 372 aa15.82■□□□□ 0.12
HDAC6-235ENST00000495515 GPR55Q9Y2T6 319 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-235ENST00000495515 EIF4E1BA6NMX2 242 aaKnown RBP15.81■□□□□ 0.12
HDAC6-235ENST00000495515 NR5A2O00482 541 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 RFXANKO14593 260 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 SNX3O60493 162 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 CD46P15529 392 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 UQCRC2P22695 453 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 ADSLP30566 484 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-235ENST00000495515 TNFSF10P50591 281 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 TP53BP2Q13625 1128 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 OR1C1Q15619 314 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 CROCCQ5TZA2 2017 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms