RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 JSRP1Q96MG2 331 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-211ENST00000494800 ZIM3Q96PE6 472 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 NXF5Q9H1B4 397 aaKnown RBP16.23■□□□□ 0.19
HDAC4-211ENST00000494800 LDAHQ9H6V9 325 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 PLSCR2Q9NRY7 297 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 PTGDR2Q9Y5Y4 395 aa16.23■□□□□ 0.19
HDAC4-211ENST00000494800 PTPN13Q12923 2485 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 FRG2CA6NGY1 282 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 MYO1GB0I1T2 1018 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 TMEM114B3SHH9 223 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 PIP5K1BO14986 540 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 BIRC5O15392 142 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 PLOD3O60568 738 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 PPM1BO75688 479 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 SNUPNO95149 360 aaKnown RBP16.22■□□□□ 0.19
HDAC4-211ENST00000494800 ZWINTO95229 277 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 HSPA4LO95757 839 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 KRT20P35900 424 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 ETV4P43268 484 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 MAGEA5P43359 124 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 ASMTP46597 345 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 SERPINB4P48594 390 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 MASP1P48740 699 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 EMDP50402 254 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 FOXO1Q12778 655 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 SLC10A1Q14973 349 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 KIAA0040Q15053 153 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 NNATQ16517 81 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 TMEM64Q6YI46 380 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 Q6ZSR9 355 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 EXOC3L1Q86VI1 746 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 PRR22Q8IZ63 422 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 ZNF808Q8N4W9 903 aaPredicted RBP16.22■□□□□ 0.19
HDAC4-211ENST00000494800 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.22■□□□□ 0.19
HDAC4-211ENST00000494800 SPPL2AQ8TCT8 520 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 TUBB1Q9H4B7 451 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 EXO5Q9H790 373 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 KCNK9Q9NPC2 374 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 CNOT11Q9UKZ1 510 aaKnown RBP16.22■□□□□ 0.19
HDAC4-211ENST00000494800 DTX4Q9Y2E6 619 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 MEMO1Q9Y316 297 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 SVILO95425 2214 aa16.22■□□□□ 0.19
HDAC4-211ENST00000494800 ATP6AP2A0A1C7CYW4 349 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 OR14I1A6ND48 311 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 TMEM233B4DJY2 109 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 E9PLN8 166 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 LSM1O15116 133 aaKnown RBP16.21■□□□□ 0.19
HDAC4-211ENST00000494800 ATP6AP2O75787 350 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 CLDN1O95832 211 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 JUNP05412 331 aaKnown RBP16.21■□□□□ 0.19
HDAC4-211ENST00000494800 ATP6AP1LQ52LC2 224 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 XKRXQ6PP77 449 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 NUP54Q7Z3B4 507 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 MRGPRGQ86SM5 289 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 CD163Q86VB7 1156 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 DOLPP1Q86YN1 238 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 KIRREL3Q8IZU9 778 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 SLC34A3Q8N130 599 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 OR2T11Q8NH01 316 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 ZFP28Q8NHY6 868 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 PPCDCQ96CD2 204 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 OMA1Q96E52 524 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 VKORC1Q9BQB6 163 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 TP63Q9H3D4 680 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-211ENST00000494800 METTL7AQ9H8H3 244 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 DDX18Q9NVP1 670 aaKnown RBP16.21■□□□□ 0.19
HDAC4-211ENST00000494800 QPCTLQ9NXS2 382 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 HIVEP3Q5T1R4 2406 aa16.21■□□□□ 0.19
HDAC4-211ENST00000494800 USP9YO00507 2555 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 A0A087WV62 115 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 WDR91A4D1P6 747 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 BCKDKO14874 412 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 TO15178 435 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 PDPK1O15530 556 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 SUSD5O60279 629 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 HCN1O60741 890 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 ABCB7O75027 752 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 ERN1O75460 977 aaKnown RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 IGHG3P01860 377 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 SERPINE1P05121 402 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 ABCB1P08183 1280 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 RPL3P39023 403 aaKnown RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 MAN2A2P49641 1150 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 DUSP8Q13202 625 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 ZNHIT3Q15649 155 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 UGT3A2Q3SY77 523 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 RFTN2Q52LD8 501 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 R3HCC1LQ7Z5L2 792 aaKnown RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 ZGRF1Q86YA3 2104 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 CHERPQ8IWX8 916 aaKnown RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 LIX1Q8N485 282 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 PHF10Q8WUB8 498 aaKnown RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 GFM2Q969S9 779 aaKnown RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 TMCO6Q96DC7 493 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 ZNF764Q96H86 408 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-211ENST00000494800 PKNOX2Q96KN3 472 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 FCRL1Q96LA6 429 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 RILPQ96NA2 401 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 TSSK3Q96PN8 268 aa16.2■□□□□ 0.18
HDAC4-211ENST00000494800 BTBD9Q96Q07 612 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms