RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 OR7G2Q8NG99 324 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 OR10G3Q8NGC4 313 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 RAB3IL1Q8TBN0 382 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 CIDECQ96AQ7 238 aaPredicted RBP14.69□□□□□ -0.06
LIME1-209ENST00000494776 MTERF3Q96E29 417 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 HSPBAP1Q96EW2 488 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 GPR137Q96N19 417 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 AMDHD1Q96NU7 426 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 NUF2Q9BZD4 464 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 NXF5Q9H1B4 397 aaKnown RBP14.69□□□□□ -0.06
LIME1-209ENST00000494776 DEPPQ9NTK1 212 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 DDX18Q9NVP1 670 aaKnown RBP14.69□□□□□ -0.06
LIME1-209ENST00000494776 CNIH4Q9P003 139 aa14.69□□□□□ -0.06
LIME1-209ENST00000494776 CROCCQ5TZA2 2017 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 ACOT7O00154 380 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 ACOX3O15254 700 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 ASNA1O43681 348 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 KITP10721 976 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 DRD5P21918 477 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 ABCD3P28288 659 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 SOX18P35713 384 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 PIGAP37287 484 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 MC3RP41968 323 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 PPICP45877 212 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 DNASE1L1P49184 302 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 MANFP55145 182 aaKnown RBP14.68□□□□□ -0.06
LIME1-209ENST00000494776 FBXW4P57775 412 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 KCNJ2P63252 427 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 EMX2Q04743 252 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 PLCXD2Q0VAA5 305 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 NTRK2Q16620 822 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 PRAMEF20Q5VT98 475 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 ZFP62Q8NB50 900 aaPredicted RBP14.68□□□□□ -0.06
LIME1-209ENST00000494776 PAQR8Q8TEZ7 354 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 DIO2Q92813 273 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 ZBED6CLQ96FA7 236 aaPredicted RBP14.68□□□□□ -0.06
LIME1-209ENST00000494776 ZNF764Q96H86 408 aaPredicted RBP14.68□□□□□ -0.06
LIME1-209ENST00000494776 PRPF18Q99633 342 aaKnown RBP14.68□□□□□ -0.06
LIME1-209ENST00000494776 AKTIPQ9H8T0 292 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 NOP53Q9NZM5 478 aaKnown RBP14.68□□□□□ -0.06
LIME1-209ENST00000494776 HAO1Q9UJM8 370 aa14.68□□□□□ -0.06
LIME1-209ENST00000494776 RP1L1Q8IWN7 2480 aaPredicted RBP14.68□□□□□ -0.06
LIME1-209ENST00000494776 A0A087WV62 115 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 A0A0G2JMM0 328 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 A0A1W2PPB8 328 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 A0A1W2PRS3 328 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 FRG2CA6NGY1 282 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 KIR3DP1A8MWS1 328 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 HMGB1P1B2RPK0 211 aaPredicted RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 SCAMP2O15127 329 aaKnown RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 HS6ST1O60243 411 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 CDC40O60508 579 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■□□□□ 8.5
LIME1-209ENST00000494776 TBX19O60806 448 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 NME6O75414 186 aaPredicted RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 ERN1O75460 977 aaKnown RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 PRPS1L1P21108 318 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 PPIAP62937 165 aaKnown RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 ZNF155Q12901 538 aaPredicted RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 PTGR1Q14914 329 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 RPS6KA2Q15349 733 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 SMU1Q2TAY7 513 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 ZNF385BQ569K4 471 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 TTMPQ5BVD1 217 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 RNFT1Q5M7Z0 435 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 CPTPQ5TA50 214 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 ZNF551Q7Z340 670 aaPredicted RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 SLC22A16Q86VW1 577 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 GHDCQ8N2G8 530 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 FBXW8Q8N3Y1 598 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 OR7A2PQ8NGA2 310 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 DYDC1Q8WWB3 177 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 ELP4Q96EB1 424 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 JSRP1Q96MG2 331 aaPredicted RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 FOLH1BQ9HBA9 442 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 ATAD3AQ9NVI7 634 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 MARCOQ9UEW3 520 aaPredicted RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 ATP6V1HQ9UI12 483 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 SLC5A6Q9Y289 635 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 OR10H1Q9Y4A9 318 aa14.67□□□□□ -0.06
LIME1-209ENST00000494776 CHCHD2Q9Y6H1 151 aaPredicted RBP14.67□□□□□ -0.06
LIME1-209ENST00000494776 PINLYPA6NC86 204 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 TRPC5OSA6NMA1 111 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 FAM166BA8MTA8 275 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 PLOD2O00469 737 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 SNNO75324 88 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 PPM1BO75688 479 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 WISP2O76076 250 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 G6PDP11413 515 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 NAGAP17050 411 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 LBPP18428 481 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 KRT20P35900 424 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 CASP6P55212 293 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 PDE7AQ13946 482 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 ZNHIT3Q15649 155 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 BNC2Q6ZN30 1099 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 RGS9BPQ6ZS82 235 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 SZRD1Q7Z422 152 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 SIAH3Q8IW03 269 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 SLC44A2Q8IWA5 706 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 SLC34A3Q8N130 599 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms